TCONS_00062853-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00062853-protein
Unique Name	TCONS_00062853-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	909

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00062853-protein ID=TCONS_00062853-protein|Name=TCONS_00062853-protein|organism=Clytia hemisphaerica|type=polypeptide|length=909bp
EYCNIIWTYGFSVRIMTNKNSLRMRICVSEPNSNKGVIARAGENTMVIVD
ASGRNNNNNNGGGGNGGPNSNIGGVAGFASYRVGDSVRVTVRGGDVREKS
YHVIVHTGDIKYAGTDANVFLTLFGSKGQSTKIPLNNSNNKKSPFERGQV
DEFEIRARDVGILYRVEVCHDNTGIFPGWFLNQIIIREKIEDGSLKRSVF
PLYDWLFKENSADNSGLTKNLELDGIPIVTMEAFPETAVEHHTDKFKLIE
EDAILLRRGQTFKMTVVLARKYHGGTDDFHFVLKTGKNARSINKTLVTIE
ECTGKEFVQRKQQDKWGYRIVDFTKTEVNVEIFIPSDALVGCFSLTLEDD
DGVIYLHDSKCCILFNPWCKDDEVYMEDEDKIKEYLLRQRGLIYRGTGYR
PVPLKWYFGQFEEICLFTVLKMLDEMKGKERTSAALIARFLSSKGNSCDN
TGLLSGRWDGNYDDGKAPTSWSSTPDILQHYQQKNLSVKYGQCWVFSAML
TTVFRAIGIPCRPVTNYSSAHDSDGNCSNDVYFDKEGEPLDDKSSDSVWN
FHVWNDVWMARPDLPPGYGGWQAVDSTPQERSMGLYQMGPCSLLAIKEGE
IHLNYDTGFVFAEVNADTIYWQQNDDGKFDPVYRSRTTIGEKVVTKAVGE
DKADDITDEYKFVEGSMMERASVKKALLKSKNIAVKAVPKEIVVEISTEQ
EAFKPGSDLTGEIKIENTCGELRTMTLFWRVFVVRYDGVVIKVVKSDKHK
ITVKGNTKHSNFFEINTKEVEDYLSEETLFRITGTVTVDTTKQLAVASHL
VNIDKPELMLKILTPDVKAGKPMQCELSMTNPLSKILTECEVKIDGSVIE
DRHVEEVSDVKEGSTFKKIVEITPDNIAEKSKKKSLMASFYSRQLGGIQQ
TIGIKVMRL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_039365	XLOC_039365	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00062853	TCONS_00062853	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002931	Transglutaminase-like
IPR001024	PLAT/LH2_dom
IPR001102	Transglutaminase_N
IPR013783	Ig-like_fold
IPR008958	Transglutaminase_C
IPR014756	Ig_E-set

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0003810	protein-glutamine gamma-glutamyltransferase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0018149	peptide cross-linking

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0018149	peptide cross-linking
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003810	protein-glutamine gamma-glutamyltransferase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002931	Transglutaminase-like	SMART	SM00460	TG_5	coord: 485..578 e-value: 3.8E-41 score: 152.7
IPR002931	Transglutaminase-like	PFAM	PF01841	Transglut_core	coord: 486..575 e-value: 2.7E-15 score: 56.7
IPR002931	Transglutaminase-like	GENE3D	3.90.260.10		coord: 374..683 e-value: 7.2E-120 score: 399.2
IPR001024	PLAT/LH2 domain	SMART	SM00308	LH2_4	coord: 99..220 e-value: 1.2E-6 score: 38.1
IPR001024	PLAT/LH2 domain	GENE3D	2.60.60.20		coord: 90..209 e-value: 4.4E-34 score: 116.6
IPR001024	PLAT/LH2 domain	PFAM	PF01477	PLAT	coord: 101..211 e-value: 8.6E-19 score: 68.1
IPR001024	PLAT/LH2 domain	PROSITE	PS50095	PLAT	coord: 99..220 score: 32.574
IPR001024	PLAT/LH2 domain	SUPERFAMILY	49723	Lipase/lipooxygenase domain (PLAT/LH2 domain)	coord: 99..210
IPR001102	Transglutaminase, N-terminal	PFAM	PF00868	Transglut_N	coord: 236..348 e-value: 6.2E-20 score: 71.6
IPR013783	Immunoglobulin-like fold	GENE3D	2.60.40.10		coord: 684..806 e-value: 2.4E-13 score: 49.6
IPR013783	Immunoglobulin-like fold	GENE3D	2.60.40.10		coord: 210..373 e-value: 6.9E-29 score: 100.4
IPR013783	Immunoglobulin-like fold	GENE3D	2.60.40.10		coord: 809..908 e-value: 2.0E-5 score: 24.5
None	No IPR available	CDD	cd01756	PLAT_repeat	coord: 99..214 e-value: 2.35301E-39 score: 141.538
None	No IPR available	SUPERFAMILY	54001	Cysteine proteinases	coord: 372..679
IPR008958	Transglutaminase, C-terminal	SUPERFAMILY	49309	Transglutaminase, two C-terminal domains	coord: 804..906
IPR008958	Transglutaminase, C-terminal	SUPERFAMILY	49309	Transglutaminase, two C-terminal domains	coord: 698..798
IPR014756	Immunoglobulin E-set	SUPERFAMILY	81296	E set domains	coord: 238..371

Blast

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BLAST of TCONS_00062853-protein vs. Swiss-Prot (Human)
Match: TGM1 (Protein-glutamine gamma-glutamyltransferase K OS=Homo sapiens GN=TGM1 PE=1 SV=4)

HSP 1 Score: 395.971 bits (1016), Expect = 1.935e-124
Identity = 230/677 (33.97%), Postives = 353/677 (52.14%), Query Frame = 0

Query:  240 EHHTDKFKLIEEDAILLRRGQTFKMTVVLARKYHGGTDDFHFVLKTGKNARSINKTLVTIEECTGKEFVQRKQQDKWGYRIVDFTKTEVNVEIFIPSDALVGCFSLTL--EDDDGVIYLH---DSKCCILFNPWCKDDEVYMEDEDKIKEYLLRQRGLIYRGTGYRPVPLKWYFGQFEEICLFTVLKMLDE--MKGKERTSAALIARFLSSKGNSCDNTGLLSGRWDGNYDDGKAPTSWSSTPDILQHYQQKNLSVKYGQCWVFSAMLTTVFRAIGIPCRPVTNYSSAHDSDGNCSNDVYFDKEGEPLDDKSSDSVWNFHVWNDVWMARPDLPPGYGGWQAVDSTPQERSMGLYQMGPCSLLAIKEGEIHLNYDTGFVFAEVNADTIYWQQNDDGKFDPVYRSRTTIGEKVVTKAVGEDKADDITDEYKFVEGSMMERASVKKALL---KSKNIAVKAVPKEIVVEISTEQEAFKPGSDLTGEIKIENTCGELRTMTLFWRVFVVRYDGVVIKVVKSDKHKITVKGNTKHSNFFEINTKEVEDYLSEETLFRITGTVTVDTTKQLAVASHLVNIDKPELMLKILTPDVKAGKPMQCELSMTNPLSKILTECEVKIDGSVIEDRHVEEVSDVKEGSTFKKIVEITPDNIAEKSKKKSLMASFYSRQLGGIQQTIGIKV 906
            EHHTD++   E D +++RRGQ F M ++L+R Y   +D     L  G N      T V I        V +     W  ++V  +   +N+ +    +A++G F  T+  + D G   L     ++  ILFNPWC +D VY++ ED  +EY+L + G IY GT  +     W +GQF+   L   L +LD   M    R     ++R +S+  NS D+ G+L G W G+Y  G  P++W  + +IL  Y +   SV YGQCWVF+ + TTV R +G+  R VTN++SAHD+D + + D+YFD+  +PL+  + DSVWNFHVWND WM RPDLP G+ GWQ VD+TPQE S G++  GPCS+ +IK G +++ YDT F+FAEVN+D +YWQ+ DDG F  VY     IG  +VTKA+  +  +DIT  YK  EGS  ER +V+ A     K    A +   +++ +++  +      G DL   + + N     RT+ L   + V  Y GV   + K  K ++ +           +  KE   +L ++    +  +  V  + Q+    H   +  P+L L +L   V  G+  + ++   NPL   LT    +++GS ++   +  V D+    T    V +    +  +   + L+AS  S QL  +   I + V
Sbjct:  128 EHHTDEY---EYDELIVRRGQPFHMLLLLSRTYES-SDRITLELLIGNNPEVGKGTHVIIP-------VGKGGSGGWKAQVVKASGQNLNLRVHTSPNAIIGKFQFTVRTQSDAGEFQLPFDPRNEIYILFNPWCPEDIVYVDHEDWRQEYVLNESGRIYYGTEAQIGERTWNYGQFDHGVLDACLYILDRRGMPYGGRGDPVNVSRVISAMVNSLDDNGVLIGNWSGDYSRGTNPSAWVGSVEILLSYLRTGYSVPYGQCWVFAGVTTTVLRCLGLATRTVTNFNSAHDTDTSLTMDIYFDENMKPLEHLNHDSVWNFHVWNDCWMKRPDLPSGFDGWQVVDATPQETSSGIFCCGPCSVESIKNGLVYMKYDTPFIFAEVNSDKVYWQRQDDGSFKIVYVEEKAIGTLIVTKAISSNMREDITYLYKHPEGSDAERKAVETAAAHGSKPNVYANRGSAEDVAMQVEAQDAVM--GQDLMVSVMLINHSSSRRTVKLHLYLSVTFYTGVSGTIFKETKKEVELAPGASDRVTMPVAYKEYRPHLVDQGAMLLNVSGHVKESGQVLAKQHTFRLRTPDLSLTLLGAAV-VGQECEVQIVFKNPLPVTLTNVVFRLEGSGLQRPKILNVGDIGGNET----VTLRQSFVPVRPGPRQLIASLDSPQLSQVHGVIQVDV 786

The following BLAST results are available for this feature:

BLAST of TCONS_00062853-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00062853-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
TGM1	1.935e-124	33.97	Protein-glutamine gamma-glutamyltransferase K OS=H...	[more]

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TCONS_00062853-protein (polypeptide) - C. hemisphaerica