TCONS_00062022-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00062022-protein
Unique Name	TCONS_00062022-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	327

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00062022-protein ID=TCONS_00062022-protein|Name=TCONS_00062022-protein|organism=Clytia hemisphaerica|type=polypeptide|length=327bp
MAESIPNMAQKIETREDEEQGKKFHETVDLLLAAGYFRARIKGLSPFDKV
VGGMTWCITTCDFDVDVDLLFQENSTIGQKIALTEKIVAVLPKMKCPHRI
EPHQIQGLDFIHIFPVIQWLVKRAIEVREELGDKIREYSINQFHKSYSMP
KDEEAKEKEFLSLDAVKTFKESYKPKRMFKKPSKFAKADEDTQVQSTLLE
YGQRFGFSGSKANKEETEAKQKAIAAGLVKVKGDESAENQEEEEKKLKLL
MEGMSETDIQQMISSQAVGSIVGMKSEEISQIAKDYLQRQAELEQEASDM
KAGKSGGXRSQKITCRDKQSLNRKRAI

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_038876	XLOC_038876	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00062022	TCONS_00062022	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR019159	DUF2037

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 276..296
None	No IPR available	COILS	Coil	Coil	coord: 237..257
IPR019159	Coiled-coil domain of unkwon function DUF2037	PFAM	PF09762	KOG2701	coord: 25..202 e-value: 2.3E-76 score: 255.9

Blast

[Close]

BLAST of TCONS_00062022-protein vs. Swiss-Prot (Human)
Match: CCD93 (Coiled-coil domain-containing protein 93 OS=Homo sapiens GN=CCDC93 PE=1 SV=2)

HSP 1 Score: 341.658 bits (875), Expect = 1.972e-113
Identity = 170/313 (54.31%), Postives = 232/313 (74.12%), Query Frame = 0

Query:   12 IETREDEEQGKKFHETVDLLLAAGYFRARIKGLSPFDKVVGGMTWCITTCDFDVDVDLLFQENSTIGQKIALTEKIVAVLPKMKCPHRIEPHQIQGLDFIHIFPVIQWLVKRAIEVREELGDKIREYSINQFHKSYSMPKDEEAKEKEFLSLDAVKTFKESYKPKRMFKKPSKFAK-ADEDTQVQSTLLEYGQRFGFSGSKANKEETEAKQKAIAAGLV---KVKGDESAENQEEEEKKLKLLMEGMSE-TDIQQMISSQAVGSIVGMKSEEISQIAKDYLQRQAELEQEASDMKAGKSGGXRSQKITCRDKQ 319
            +ETREDEEQ  K  E ++LL+AAGYFRARIKGLSPFDKVVGGMTWCITTC+FDVDVDLLFQENSTIGQKIAL+EKIV+VLP+MKCPH++EPHQIQG+DFIHIFPV+QWLVKRAIE +EE+GD IR YS++QF K+YS+P+D++  +++  ++  V    E YKP+R +K+     +  DE++++ +TLLEYG+R+GFS  ++  E+ E K+ A+ AGL    K    E  E +  EE++++ LM  M+   + +  +++ +VG IVG+ S EI QI  +Y ++Q+EL  E S  K G S   R +K+   +KQ
Sbjct:   15 VETREDEEQNVKLTEILELLVAAGYFRARIKGLSPFDKVVGGMTWCITTCNFDVDVDLLFQENSTIGQKIALSEKIVSVLPRMKCPHQLEPHQIQGMDFIHIFPVVQWLVKRAIETKEEMGDYIRSYSVSQFQKTYSLPEDDDFIKRKEKAIKTVVDLSEVYKPRRKYKRHQGAEELLDEESRIHATLLEYGRRYGFS-RQSKMEKAEDKKTALPAGLSATEKADAHEEDELRAAEEQRIQSLMTKMTAMANEESRLTASSVGQIVGLCSAEIKQIVSEYAEKQSELSAEESPEKLGTSQLHR-RKVISLNKQ 325

The following BLAST results are available for this feature:

BLAST of TCONS_00062022-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00062022-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CCD93	1.972e-113	54.31	Coiled-coil domain-containing protein 93 OS=Homo s...	[more]

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TCONS_00062022-protein (polypeptide) - C. hemisphaerica