TCONS_00061414-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00061414-protein
Unique Name	TCONS_00061414-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	382

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00061414-protein ID=TCONS_00061414-protein|Name=TCONS_00061414-protein|organism=Clytia hemisphaerica|type=polypeptide|length=382bp
MLPLTRTDQYKGDEFKPGVRIWCRKILIWIKSIFEDKTSRNIFCFLVLNL
VFAFLELFYGMWTNSLGLISDSFHMFFDCTALLTGLIATVISRWGKNERY
SYGYVRAEIMAGFMNALFLMFVAFFIFSEAVERAFHPPHVEHERLLLISV
LGFLVNLVGIFVFGHGHGDDGHGHSHAGSSHGHSHAFGGSHGQSHSHGET
DDFHNDFHNKKKAETGDHGHSHGSHGHSHEGNIQVSSKQILNGVFLHILA
DTLGSVGVIVSSLLIKYFGWMMADPICSMMIAILISLSIWPLMMDTLSVL
MQRTPKEIEYELPIAYQRVSQMEGVYSVQDPHFWTLCSKNYIGNLRLLIS
PKADAASILSQTHAIFTQLGVKQLYVQIERSY

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_038530	XLOC_038530	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00061414	TCONS_00061414	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002524	Cation_efflux

Vocabulary: **Molecular Function**
Term	Definition
GO:0008324	cation transmembrane transporter activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0006812	cation transport
GO:0055085	transmembrane transport

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006812	cation transport
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008324	cation transmembrane transporter activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002524	Cation efflux protein	PFAM	PF01545	Cation_efflux	coord: 43..301 e-value: 3.5E-48 score: 163.9
IPR002524	Cation efflux protein	TIGRFAM	TIGR01297	TIGR01297	coord: 39..380 e-value: 4.0E-72 score: 240.8
None	No IPR available	GENE3D	1.20.1510.10		coord: 37..301 e-value: 3.0E-65 score: 219.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 172..231
None	No IPR available	SUPERFAMILY	161111	Cation efflux protein transmembrane domain-like	coord: 234..302 coord: 37..167

Blast

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BLAST of TCONS_00061414-protein vs. Swiss-Prot (Human)
Match: ZNT7 (Zinc transporter 7 OS=Homo sapiens GN=SLC30A7 PE=2 SV=1)

HSP 1 Score: 414.846 bits (1065), Expect = 1.309e-144
Identity = 221/402 (54.98%), Postives = 273/402 (67.91%), Query Frame = 0

Query:    1 MLPLTRTDQYKGDEFKPGVRIWCRKILIWIKSIFEDKTSRNIFCFLVLNLVFAFLELFYGMWTNSLGLISDSFHMFFDCTALLTGLIATVISRWGKNERYSYGYVRAEIMAGFMNALFLMFVAFFIFSEAVERAFHPPHVEHERLLLISVLGFLVNLVGIFVFG-------------------HGHGDDGHGHSHAGSSHGHSHAFGGSHGQSHSHGETDDFHNDFHNKKKAETGDHGHSHGSHGHSHEG----NIQVSSKQILNGVFLHILADTLGSVGVIVSSLLIKYFGWMMADPICSMMIAILISLSIWPLMMDTLSVLMQRTPKEIEYELPIAYQRVSQMEGVYSVQDPHFWTLCSKNYIGNLRLLISPKADAASILSQTHAIFTQLGVKQLYVQIE 379
            MLPL+  D    DE+KP       KI  W +SI  DKTSRN+F FL LNL FAF+EL YG+W+N LGLISDSFHMFFD TA+L GL A+VIS+W  N+ +SYGYVRAE++AGF+N LFL+F AFFIFSE VERA  PP V HERLLL+S+LGF+VNL+GIFVF                    +G  D  HGH      H HSH     HG +HSH                   DH H HG H HSH+G         S+QIL GVFLHILADTLGS+GVI S+++++ FG M+ADPICS++IAILI +S+ PL+ +++ +LMQRTP  +E  LP  YQRV Q++GVYS+Q+ HFWTLCS  Y+G L+L+++P ADA  ILSQTH IFTQ GV+QLYVQI+
Sbjct:    1 MLPLSIKD----DEYKPPKFNLFGKISGWFRSILSDKTSRNLFFFLCLNLSFAFVELLYGIWSNCLGLISDSFHMFFDSTAILAGLAASVISKWRDNDAFSYGYVRAEVLAGFVNGLFLIFTAFFIFSEGVERALAPPDVHHERLLLVSILGFVVNLIGIFVFKHGGHGHSHGSGHGHSHSLFNGALDQAHGH----VDHCHSHEV--KHGAAHSH-------------------DHAHGHG-HFHSHDGPSLKETTGPSRQILQGVFLHILADTLGSIGVIASAIMMQNFGLMIADPICSILIAILIVVSVIPLLRESVGILMQRTPPLLENSLPQCYQRVQQLQGVYSLQEQHFWTLCSDVYVGTLKLIVAPDADARWILSQTHNIFTQAGVRQLYVQID 372

The following BLAST results are available for this feature:

BLAST of TCONS_00061414-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00061414-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ZNT7	1.309e-144	54.98	Zinc transporter 7 OS=Homo sapiens GN=SLC30A7 PE=2...	[more]

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TCONS_00061414-protein (polypeptide) - C. hemisphaerica