TCONS_00061128-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00061128-protein
Unique Name	TCONS_00061128-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	671

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00061128-protein ID=TCONS_00061128-protein|Name=TCONS_00061128-protein|organism=Clytia hemisphaerica|type=polypeptide|length=671bp
MKRRTIDASKLRRPTKRSRITDSVNGSWLLYLRFFVVWLLIITVDFALEF
RIEFLWPFWLLIKSSFDSFRYQGMALTLLFLCITLLSDVICFMFLPLHWL
FFVASTYVWVQFVITTERGPCLATVALWLLFVYVEASVRLREIKSLPFNL
DICRPFAAHCIGYPVVSLGYGFKSFVGYKVKNYKKTEVSHQNDFYQQLVS
YALPIEVQSLYNEILIKKPLVNGINSKTDIDTMFSNDTRNKKNQKSNEND
EKSSSSLSLHDLETISSIPSKDSYISSKRHLNHHDNYESGFVRVTKLSSN
LKSNGDVSGNKQQRSSKHNKQPKAPAESDYELDISDSEESTSSSRLSHDN
SPKSHRSATIDNLQNKLKEEQVSRRRSEQQVCQMECDMKKLRSDLHSVRQ
TESEFRTQVNSSLIAERYMKAELDQLKSDNENLQQKISSFNSNKSQDKSL
ISSLERKLKNERDNRAQLESQLKESKKKSTSESPSDLKLANHNACNARNN
ELEADLQRMQAKLDEANRKMEALKKVESNRKHNENDTEKIKKEFEILTNA
LNAMQGKNLHLENSLSSETRLKLDLFSALGDTRRQLEIAQDRMKEKCKEV
EMLKGKIAEVMAVMPPQYHSSISSFGNGGGTGNGSAIPVSSQSESKSSFI
TKKSADPVVTSASFATTNGIA

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_038353	XLOC_038353	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00061128	TCONS_00061128	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR019130	Macoilin

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 579..606
None	No IPR available	COILS	Coil	Coil	coord: 360..380
None	No IPR available	COILS	Coil	Coil	coord: 416..478
None	No IPR available	COILS	Coil	Coil	coord: 492..543
None	No IPR available	GENE3D	1.20.5.170		coord: 430..525 e-value: 5.0E-5 score: 22.8
None	No IPR available	GENE3D	1.20.58.130		coord: 354..429 e-value: 1.3E-4 score: 21.6
None	No IPR available	GENE3D	1.20.5.340		coord: 526..614 e-value: 0.29 score: 10.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 633..652
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 456..491
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 231..258
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 300..358
IPR019130	Macoilin	PFAM	PF09726	Macoilin	coord: 2..643 e-value: 2.6E-175 score: 584.7

Blast

[Close]

BLAST of TCONS_00061128-protein vs. Swiss-Prot (Human)
Match: MACOI (Macoilin OS=Homo sapiens GN=TMEM57 PE=1 SV=1)

HSP 1 Score: 454.907 bits (1169), Expect = 6.537e-152
Identity = 264/656 (40.24%), Postives = 401/656 (61.13%), Query Frame = 0

Query:    1 MKRRTIDASKLRRPTKRSRITDSVNGSWLLYLRFFVVWLLIITVDFALEFRIEFLWPFWLLIKSSFDSFRYQGMALTLLFLCITLLSDVICFMFLPLHWLFFVASTYVWVQFVITTERGPCLATVALWLLFVYVEASVRLREIKSLPFNLDICRPFAAHCIGYPVVSLGYGFKSFVGYKVKNYKKTEVSHQNDFYQQLVSYALPIEVQSLYNE-----------------ILIKKPLVNGINSKTDIDTMFSN-DTRNKKNQKSNENDEKSSSSLSLHDLETISS----IPSKDSYISSKRHLNHHDNYESGFVRVTKLSSNLKSNGDVSGNKQQRSSKHNKQPKAPAESDYELDISDSEESTSSSRLSHDNSPKSHRSATIDNLQNKLKEEQVSRRRSEQQVCQMECDMKKLRSDLHSVRQTESEFRTQVNSSLIAERYMKAELDQLKSDNENLQQKISSFNSNKSQDKSLISSLERKLKNERDNRAQLESQL-----KESKKKSTSESPSDLKLANHNACNA----RNNELEADLQRMQAKLDEANRKMEALK-KVESNRKHNENDTEKIKKEFEILTNALNAMQGKNLHLENSLSSETRLKLDLFSALGDTRRQLEIAQDRMKEKCKEVEMLKGKIAEVMAVMPPQYHSSISS 624
            MKRR  D SKLRRP KR+RIT+ + GS  LYL+F VVW L++  DF LEFR E+LWPFWL I+S +DSFRYQG+A ++ F+C+   S++IC +F+P+ WLFF ASTYVWVQ+V  TERG CL TV+LW+LFVY+EA++R +++K+  F++D+CRPFAAHCIGYPVV+LG+GFKS+V YK++  K+ EV  +N+FY QL+  ALP E Q L  +                 ILI      GI +   + T     + R K  +K  +  + +    + + L+ + S    I   +++I+SKR  N         ++    +++ K+  + SG         N  P++ + ++  +  S S+        S   SP +H+    D ++N +   Q+S+  +   + ++E D+KKL++DL + RQ E E R+Q++S    ER +++E+ QL+ +NE LQ K+ +    K +DK  IS LE+KLK E++ R+ +E QL     ++  +++T+        A+   C      R  ELEA+ +++   +     ++  L+ KV+  RK+ EN+     K+ E+L +AL+AMQ K  HLENSLS+ETR+KLDLFSALGD +RQLEIAQ ++ +K +E++ LK KIAEVMAVMP   +S+ +S
Sbjct:    1 MKRRNADCSKLRRPLKRNRITEGIYGSTFLYLKFLVVWALVLLADFVLEFRFEYLWPFWLFIRSVYDSFRYQGLAFSVFFVCVAFTSNIICLLFIPIQWLFFAASTYVWVQYVWHTERGVCLPTVSLWILFVYIEAAIRFKDLKN--FHVDLCRPFAAHCIGYPVVTLGFGFKSYVSYKMRLRKQKEVQKENEFYMQLLQQALPPEQQMLQKQEKEAEEAAKGLPDMDSSILIHHN--GGIPANKKLSTTLPEIEYREKGKEKDKDAKKHNLGINNNNILQPVDSKIQEIEYMENHINSKRLNNDLVGSTENLLKEDSCTASSKNYKNASGVV-------NSSPRSHSATNGSIPSSSSKNEKKQKCTS--KSPSTHK----DLMENCIPNNQLSKPDA---LVRLEQDIKKLKADLQASRQVEQELRSQISSLSSTERGIRSEMGQLRQENELLQNKLHNAVQMKQKDKQNISQLEKKLKAEQEARSFVEKQLMEEKKRKKLEEATAARAVAFAAASRGECTETLRNRIRELEAEGKKLTMDMKVKEDQIRELELKVQELRKYKENE-----KDTEVLMSALSAMQDKTQHLENSLSAETRIKLDLFSALGDAKRQLEIAQGQILQKDQEIKDLKQKIAEVMAVMPSITYSAATS 631

The following BLAST results are available for this feature:

BLAST of TCONS_00061128-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00061128-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
MACOI	6.537e-152	40.24	Macoilin OS=Homo sapiens GN=TMEM57 PE=1 SV=1	[more]

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TCONS_00061128-protein (polypeptide) - C. hemisphaerica