TCONS_00060976-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00060976-protein
Unique Name	TCONS_00060976-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	213

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00060976-protein ID=TCONS_00060976-protein|Name=TCONS_00060976-protein|organism=Clytia hemisphaerica|type=polypeptide|length=213bp
IYLFLSFRYNKMNICNNYIPKRLFRLADVTRRLVTSARFAAANQQVERVQ
EERNELEESDPFLKNEIKKYNTGKRWLARMMGQDPENFSQKDVDEAIAYL
LPSSLFAKDARPVMKHPYELFPKTKESLFDSNNRPLSSAFYTGKPKFYDL
TYQVWELKEKLDTNTAITAEDSPAPSNEDKVMQWMKQYQLEQKLNEKLNE
KISTGAKIKRETK

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_038276	XLOC_038276	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00060976	TCONS_00060976	Clytia hemisphaerica	transcript

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 39..66

Blast

[Close]

BLAST of TCONS_00060976-protein vs. Swiss-Prot (Human)
Match: RT09 (28S ribosomal protein S9, mitochondrial OS=Homo sapiens GN=MRPS9 PE=1 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 3.887e-33
Identity = 60/146 (41.10%), Postives = 92/146 (63.01%), Query Frame = 0

Query:   59 SDPFLKNEIKKYNTGKRWLARMMGQDPENFSQKDVDEAIAYLLPSSLFAKDARPVMKHPYELFPKTKESLFDSNNRPLSSAFYTGKPKFYDLTYQVWELKEKLDTNTAITAEDSPAPS---NEDKVM-QWMKQYQLEQKLNEKLNE 200
            ++ F+K +I+++N GKR LA MMG+DPE F+Q+D+D AIAYL PS LF K ARPVMKHP ++FP+ +   +  + RP    FYTGK  +Y L + V+ +   L+ + +     S  P      D +  +W+ + +LE+ L EKL++
Sbjct:   70 TEDFIKKQIEEFNIGKRHLANMMGEDPETFTQEDIDRAIAYLFPSGLFEKRARPVMKHPEQIFPRQRAIQWGEDGRPFHYLFYTGKQSYYSLMHDVYGMLLNLEKHQSHLQAKSLLPEKTVTRDVIGSRWLIKEELEEMLVEKLSD 215

The following BLAST results are available for this feature:

BLAST of TCONS_00060976-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00060976-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
RT09	3.887e-33	41.10	28S ribosomal protein S9, mitochondrial OS=Homo sa...	[more]

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TCONS_00060976-protein (polypeptide) - C. hemisphaerica