TCONS_00060962-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00060962-protein
Unique NameTCONS_00060962-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1455

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00060962-protein ID=TCONS_00060962-protein|Name=TCONS_00060962-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1455bp
MDEAIKVMPRTHHRLVLFKHRVITEAKLNKPTQFDMGKFRYENENMLAQM
WCRVAKHSKKQPDQLSAYINAIEALTSDENLYQKVDYLAEFGEWLFVHEY
PVSKATDQFYFAISLVLNGMYGTGMPNNILTDEDEIKLLSHVTDIKQMDW
LIRLYVMLSDMLQQKGKEYERLVLAAATLVQRIWKVSIGNAEKAIKNGVP
PSMEAPLSPKTKKASKTRPGSKSSSALPTSYEKWALFTLPEKLNEYFVMD
KTGYYINKTSITRPTLSMFYYEKLCKNLNLIGYHHLGIPVLSLMSYLAND
VLEMKDLTTLIDLKMTSLCEQLNMVNACTHYHTKLSSLKLTMEEQEASRE
EVEKWRERERQVLFEEQRQENETFGFIKSHQSIGTLQKHKPLVSSWTKRE
VWVQVAEYLIGKYQFDNARVYLEEASTSANVFSDETIKEMITFNYALISF
QQRDWGKVMSTITSLKWKQDNQEFWLKKILLLCDAIHNFSIQEISFQNHI
DDTGFEKAKKILQNAVYTIQQACATRTNGLYLGPYMKAKLLYRLGGLVYT
ESTEKRYRDDDKQRIALLKEACKRLDESLEILIAVEYKKDTVEVLLLKVK
IQRELALLNDDLEAKKMSLVETLTMANTCEQSATSMAADMSALSSKEEMR
DIFLPIQHDVIMARKLCVAVLYDILLIATEEKKKLRLIEEAKAPMERIID
EYVDITPTLSPSQQEWQKTLSTAAEKIIMMVNSIKTLGLSIPLFSAEASL
EIGYVLKLLSQLNSASRYDSWDLSMIKKFVDGEEESDSKTSIASTPLDLM
LEYEAFRHQQIQSVHNMTQALQIGLQHSLTTVVKDASYQLLDCVGSFDAH
SCVQLLALFQSATASLRCQQIVERVFLDPNTSASASLYKQKLSLSQACVS
QMDNVNSSLAEHEWYKRMSIHKTHLDIIKELPFNITYIILQHSPSKDFLY
GGVLEKQQSSTANKKRSANRDVIGRISTNQKLLDDLLAMMEEFKTMVRSE
HSREIYIQAQIARRHGFFNDKKYEEKDCELKSELEEIKNHFDALITTLEA
YMGPLLTKIHQSLSIDPIPQTVVILADEDLLEFPLECLSVFRRSEITTVS
RDFSLQFFYHRFKRGEVDFACPRGEHAKSATPVKIKSDKGSKDKAGGKNA
AKHVEKKSSSGGKEFTIDKENIVVDISQLKYLLDPLQDGIKGSPNHAETI
LEELTSRFKGKVSKWSGIKGSEDVTNAKEMQLLLQISPAFLFHGYERLLA
LLPAFSMLPLDLSDCMMALLVDHVHTAKSNSRQGSLDTLKSPSDLDLERP
VYTAMILSLCGVSSVLSNQWYSSESENKQRVSRFFTHYFEDGLTNGQAAR
CLQSPKVEKPPVQKKEEEPPAEKTPAKGGKNKLNSSMNKSRGTPGSNSRA
PSAQSVAPPPTVEKKVEKVVETESESSESAIDKTKDSSFEYFNMVLYGLP
NLISH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038270XLOC_038270Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00060962TCONS_00060962Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 338..358
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1350..1435
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 199..227
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1130..1162

Blast
BLAST of TCONS_00060962-protein vs. Swiss-Prot (Human)
Match: CFA46 (Cilia- and flagella-associated protein 46 OS=Homo sapiens GN=CFAP46 PE=2 SV=3)

HSP 1 Score: 201.06 bits (510), Expect = 1.038e-51
Identity = 263/1156 (22.75%), Postives = 485/1156 (41.96%), Query Frame = 0
Query:  227 LPTSYEKWALFTLPEKLNEYFVMDKTGYYINKTSITRPTLSMFYYEKLCKNLNLIGYHHLGIPVLSLMSYLANDVLEMKDLTTLIDLKMTSLCEQLNMVNACTHYHTKLSSLKLTMEEQEASREEVEKWRERERQVLFEEQRQE-NETFGFIKSHQSIGTLQKHKPL-VSSWTKRE--------VWVQVAEYLIGKYQFDNARVYLEEASTSANVFSDETIKEMITFNYALISFQQRDWGKVMSTITSLKWKQDNQEFWLKKILLLCDAIHNF--SIQEISFQNHIDDTGFEKAKKILQNAVYTIQQACATRTNGLYLGPYMKAKLLYRLGGL--------VYTESTEKRYRDDDKQRIALLKEACKRLDESLEILIAVEYKKDTVEVLLLKVKIQRELALLNDDLEAKKMSLVETLTMAN--TCEQSA-------------TSMAAD------MSALSSKEEMRDIFLPIQHDVIMARKLCVAVLYDILLIATEEKKKLRLIEEAKAPMERIIDEYVDITPTLSPSQQEWQKTLSTAAEKIIMMVNSIKTLGLSIPLFSAEASLEIGYVLKLLS-QLNSASRYDSWD--------LSMIKKF-VDGEEESDSKTS-----IASTPLDLMLEYEAFRHQQI-------QSVHNMTQALQIGLQHSLTTVVKDASYQLLDCVGSFDAHSCVQLLALFQSATASLRCQQIVERVFLDPNTSASASLYKQKLSLSQACVSQMDNVNSSL---------AEHEWYKRMSIHKTHLDIIKELPFNITYIILQHSPSKDFLYGGVLEKQQSSTANKKR---SANRDVIGRISTNQKLLDDLLAMMEEFKTMVRSEHSREIYIQAQIARRHGFFNDKKYEEKDCELK------SELEEIKNHFDALITTLEAYM-GPLL---------------TKIHQSLSIDP-IPQTVVILADEDLLEFPLECLSVFRRSEITTVSRDFSLQFFYHRFKRGEVDFACPRGEHAKSATPVKIKSDKGSKDKAGGKNAAKHVEKKSSSGGKEFTIDKENIVVDISQLKYLLDPLQDGIKGSPNHAETILEELTSRFKGK-VSKWSGIKGSEDVTNAKEMQLLLQISPAFLFHGYERLLALLPAFSMLPLDLSDCMMALLVDHVHTAKSNSRQ 1283
            LP S E+WA ++ PE++      D++   +N +SI +PT S+++ + L K L  +  H L +PVL L   +++ V+  K L+ L  L++   C +L +  A   +   +  + ++  EQ + R+E+   +E+ ++ L EE     NE    ++  +      K K L ++  T R+        +W+  AE L+    +  AR+ L EA  +     +   +       A ++ +++++G+    I   +    ++EFW    L L +A+ +   S +E +   HI    F+K    L NA   +++    R N L L  +M   L  R   L          TE TE            LLKE    L E     I    K++ V+V L + KI+R  A    D E K    +E   +A     E+                +MA +      +  L S ++++++  P+   +   +   V +  D+L    EE       +  +  +E+++ +Y+  T   +    +W     T A   +  + S++ L +      A      G  L LL+ Q +       W+        LS +K   ++ EEE  +K+S       + P +     E  + + +       Q+   + Q LQ+ L   L  V   AS ++++CVG+ D  +  Q LAL QS +AS    + +  V L    + S+S     L L      Q D   +SL         A  + ++ + + + H +++ E+P     + L  S  +  LYG   EK +  TA K +         + R++ +      LLA  ++F+   ++    ++Y +             + EEK+  ++        LEE+      L++  +A +  P +               T   Q  ++ P +   +V++AD  LLE PLE LSVF    I++VSR+FSLQ  ++R  + E +                +K +  S+D        + + KK   G    TI  + I+VD    K+++DP ++          +I +++  RF+    S+W+G  GS+   +  + +  L     F F+G E  L+ +    ++ ++L +C +A+L+D   + +S  R 
Sbjct: 1417 LPMSIEEWASYSCPEEVLSVLKQDRSDSTVNPSSIQKPTYSLYFLDHLVKALQKMCLHELTVPVLQLGVLISDSVVGSKGLSDLYHLRLAHACSELKLREAAARHEEAVGQVCVSELEQASCRKEIALKKEKNKEPLLEESLPALNEQTLPVQPGEIKPLDAKDKILKMNGETGRDLDGTSFPHLWMLKAEVLLEMNLYQPARLLLSEAYLAFQELDEPCAEAQCLLLLAQLANKEKNYGQAKKMIAQAQHLGGSEEFWYNSTLTLAEALLSMEHSGREATV-CHI----FQK----LINAFKILKK---ERPNRLPLLEFMITDLEARCLSLRVRVAQHSAVTEPTECSL---------LLKEMDDGLLEIERKFIDCGCKENCVDVKLERAKIKRLRAQNEKDEEQKTAYYLEAYGLAQGAVAEEEGRLHSIQGLYGLAQGAMAEEEGRLHSVQGLLSLQDLQNVNTPLMRKLARLKLGLVEMALDMLQFIWEEAHGQ---QSEQGSLEKLLADYLQNTSDYTSVGLQWFTLKRTLAHGALAQLGSLQPLSVGCVEIRARLLGLAGRALHLLAMQADPVHPTCYWEAGPSVGAKLSGLKSLELEVEEEGATKSSRDPPASRAAPEEHCRRGEDLKRRMVLAQQYLAQASEVLLQCLQVALGSGLLDVAAAASLEMVECVGTLDPATTCQFLALSQSCSAS----ETMRDVLLAATANTSSSQLAALLQLQHQLRCQ-DRTTTSLGARVEQRLAAVSKAWQNLCVTEQHFNLLNEMPPTFWILFLHLSGDRSRLYGAAYEKPKFITAAKGKVQAVGGSCKVMRLAISPTAFSHLLACAQQFRKQTQA----QVYSEDMALNIGSEPEGLQVEEKERPVQRLSSVLGPLEELLQPLFPLLSLSKARVQTPAVVADSGKSKGKDKERKTSTGQHSTVQPEVADKIVLVADRHLLELPLEGLSVFDEGTISSVSREFSLQMLWNRLHKEETEGG--------------VKKEGRSRDP-----KKRSLAKKGRKGSIPRTIPPDCIIVDSDNFKFVVDPYEEAQGPEMLTPVSITQDILERFQDTFTSRWAGHLGSKHFPSQAQWEQALGSCSGFFFYGMESFLSHILVERLVAMNLQECQVAVLLDLARSYQSLKRH 2520          

HSP 2 Score: 134.42 bits (337), Expect = 2.595e-31
Identity = 73/217 (33.64%), Postives = 124/217 (57.14%), Query Frame = 0
Query:    1 MDEAIKVMPRTHHRLVLFKHRVITEAKLNKPTQFDMGKFRYENENMLAQMWCRVAKHSKKQPDQLSAYINAIEALTSDENLYQKVDYLAEFGEWLFVHEYPVSKATDQFYFAISLVL---------------NGMY-GTGM-PNNILTDEDEIKLLSHVTDIKQMDWLIRLYVMLSDMLQQKGKEYERLVLAAATLVQRIWKVSIGNAEKAIKNGVP 200
            +DEA++V+PRT HRL++FKH VI +AKL +    ++ KF+ E+E+ LA+MW R+A +S     +L+ Y NAI+AL   E  +QKV+YL EFG+WL    +P+        +A+ ++L               +G Y    M P + +++ +E   L  +  ++Q++ L R++++L+ +L    + YE   LAA    + IW+VS+  A K++    P
Sbjct: 1134 LDEAVQVLPRTAHRLLIFKHMVIVKAKLGQNFSMEIQKFKAESEDYLARMWHRLALNSPSVSGELACYNNAIQALQKPEMEWQKVEYLMEFGQWLHHRHFPLEDVVFHLRWAVEILLAMKPPGDVPEPQPTPDGEYVAVEMPPRSPVSEAEEAVSLEQLRSVRQLEALARVHILLALVLSPGAEGYEDCCLAAYAFFRHIWQVSLMTAGKSVLENRP 1350          
The following BLAST results are available for this feature:
BLAST of TCONS_00060962-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CFA461.038e-5122.75Cilia- and flagella-associated protein 46 OS=Homo ... [more]
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