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Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00060962-protein ID=TCONS_00060962-protein|Name=TCONS_00060962-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1455bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00060962-protein vs. Swiss-Prot (Human)
Match: CFA46 (Cilia- and flagella-associated protein 46 OS=Homo sapiens GN=CFAP46 PE=2 SV=3) HSP 1 Score: 201.06 bits (510), Expect = 1.038e-51 Identity = 263/1156 (22.75%), Postives = 485/1156 (41.96%), Query Frame = 0
Query: 227 LPTSYEKWALFTLPEKLNEYFVMDKTGYYINKTSITRPTLSMFYYEKLCKNLNLIGYHHLGIPVLSLMSYLANDVLEMKDLTTLIDLKMTSLCEQLNMVNACTHYHTKLSSLKLTMEEQEASREEVEKWRERERQVLFEEQRQE-NETFGFIKSHQSIGTLQKHKPL-VSSWTKRE--------VWVQVAEYLIGKYQFDNARVYLEEASTSANVFSDETIKEMITFNYALISFQQRDWGKVMSTITSLKWKQDNQEFWLKKILLLCDAIHNF--SIQEISFQNHIDDTGFEKAKKILQNAVYTIQQACATRTNGLYLGPYMKAKLLYRLGGL--------VYTESTEKRYRDDDKQRIALLKEACKRLDESLEILIAVEYKKDTVEVLLLKVKIQRELALLNDDLEAKKMSLVETLTMAN--TCEQSA-------------TSMAAD------MSALSSKEEMRDIFLPIQHDVIMARKLCVAVLYDILLIATEEKKKLRLIEEAKAPMERIIDEYVDITPTLSPSQQEWQKTLSTAAEKIIMMVNSIKTLGLSIPLFSAEASLEIGYVLKLLS-QLNSASRYDSWD--------LSMIKKF-VDGEEESDSKTS-----IASTPLDLMLEYEAFRHQQI-------QSVHNMTQALQIGLQHSLTTVVKDASYQLLDCVGSFDAHSCVQLLALFQSATASLRCQQIVERVFLDPNTSASASLYKQKLSLSQACVSQMDNVNSSL---------AEHEWYKRMSIHKTHLDIIKELPFNITYIILQHSPSKDFLYGGVLEKQQSSTANKKR---SANRDVIGRISTNQKLLDDLLAMMEEFKTMVRSEHSREIYIQAQIARRHGFFNDKKYEEKDCELK------SELEEIKNHFDALITTLEAYM-GPLL---------------TKIHQSLSIDP-IPQTVVILADEDLLEFPLECLSVFRRSEITTVSRDFSLQFFYHRFKRGEVDFACPRGEHAKSATPVKIKSDKGSKDKAGGKNAAKHVEKKSSSGGKEFTIDKENIVVDISQLKYLLDPLQDGIKGSPNHAETILEELTSRFKGK-VSKWSGIKGSEDVTNAKEMQLLLQISPAFLFHGYERLLALLPAFSMLPLDLSDCMMALLVDHVHTAKSNSRQ 1283
LP S E+WA ++ PE++ D++ +N +SI +PT S+++ + L K L + H L +PVL L +++ V+ K L+ L L++ C +L + A + + + ++ EQ + R+E+ +E+ ++ L EE NE ++ + K K L ++ T R+ +W+ AE L+ + AR+ L EA + + + A ++ +++++G+ I + ++EFW L L +A+ + S +E + HI F+K L NA +++ R N L L +M L R L TE TE LLKE L E I K++ V+V L + KI+R A D E K +E +A E+ +MA + + L S ++++++ P+ + + V + D+L EE + + +E+++ +Y+ T + +W T A + + S++ L + A G L LL+ Q + W+ LS +K ++ EEE +K+S + P + E + + + Q+ + Q LQ+ L L V AS ++++CVG+ D + Q LAL QS +AS + + V L + S+S L L Q D +SL A + ++ + + + H +++ E+P + L S + LYG EK + TA K + + R++ + LLA ++F+ ++ ++Y + + EEK+ ++ LEE+ L++ +A + P + T Q ++ P + +V++AD LLE PLE LSVF I++VSR+FSLQ ++R + E + +K + S+D + + KK G TI + I+VD K+++DP ++ +I +++ RF+ S+W+G GS+ + + + L F F+G E L+ + ++ ++L +C +A+L+D + +S R
Sbjct: 1417 LPMSIEEWASYSCPEEVLSVLKQDRSDSTVNPSSIQKPTYSLYFLDHLVKALQKMCLHELTVPVLQLGVLISDSVVGSKGLSDLYHLRLAHACSELKLREAAARHEEAVGQVCVSELEQASCRKEIALKKEKNKEPLLEESLPALNEQTLPVQPGEIKPLDAKDKILKMNGETGRDLDGTSFPHLWMLKAEVLLEMNLYQPARLLLSEAYLAFQELDEPCAEAQCLLLLAQLANKEKNYGQAKKMIAQAQHLGGSEEFWYNSTLTLAEALLSMEHSGREATV-CHI----FQK----LINAFKILKK---ERPNRLPLLEFMITDLEARCLSLRVRVAQHSAVTEPTECSL---------LLKEMDDGLLEIERKFIDCGCKENCVDVKLERAKIKRLRAQNEKDEEQKTAYYLEAYGLAQGAVAEEEGRLHSIQGLYGLAQGAMAEEEGRLHSVQGLLSLQDLQNVNTPLMRKLARLKLGLVEMALDMLQFIWEEAHGQ---QSEQGSLEKLLADYLQNTSDYTSVGLQWFTLKRTLAHGALAQLGSLQPLSVGCVEIRARLLGLAGRALHLLAMQADPVHPTCYWEAGPSVGAKLSGLKSLELEVEEEGATKSSRDPPASRAAPEEHCRRGEDLKRRMVLAQQYLAQASEVLLQCLQVALGSGLLDVAAAASLEMVECVGTLDPATTCQFLALSQSCSAS----ETMRDVLLAATANTSSSQLAALLQLQHQLRCQ-DRTTTSLGARVEQRLAAVSKAWQNLCVTEQHFNLLNEMPPTFWILFLHLSGDRSRLYGAAYEKPKFITAAKGKVQAVGGSCKVMRLAISPTAFSHLLACAQQFRKQTQA----QVYSEDMALNIGSEPEGLQVEEKERPVQRLSSVLGPLEELLQPLFPLLSLSKARVQTPAVVADSGKSKGKDKERKTSTGQHSTVQPEVADKIVLVADRHLLELPLEGLSVFDEGTISSVSREFSLQMLWNRLHKEETEGG--------------VKKEGRSRDP-----KKRSLAKKGRKGSIPRTIPPDCIIVDSDNFKFVVDPYEEAQGPEMLTPVSITQDILERFQDTFTSRWAGHLGSKHFPSQAQWEQALGSCSGFFFYGMESFLSHILVERLVAMNLQECQVAVLLDLARSYQSLKRH 2520 HSP 2 Score: 134.42 bits (337), Expect = 2.595e-31 Identity = 73/217 (33.64%), Postives = 124/217 (57.14%), Query Frame = 0
Query: 1 MDEAIKVMPRTHHRLVLFKHRVITEAKLNKPTQFDMGKFRYENENMLAQMWCRVAKHSKKQPDQLSAYINAIEALTSDENLYQKVDYLAEFGEWLFVHEYPVSKATDQFYFAISLVL---------------NGMY-GTGM-PNNILTDEDEIKLLSHVTDIKQMDWLIRLYVMLSDMLQQKGKEYERLVLAAATLVQRIWKVSIGNAEKAIKNGVP 200
+DEA++V+PRT HRL++FKH VI +AKL + ++ KF+ E+E+ LA+MW R+A +S +L+ Y NAI+AL E +QKV+YL EFG+WL +P+ +A+ ++L +G Y M P + +++ +E L + ++Q++ L R++++L+ +L + YE LAA + IW+VS+ A K++ P
Sbjct: 1134 LDEAVQVLPRTAHRLLIFKHMVIVKAKLGQNFSMEIQKFKAESEDYLARMWHRLALNSPSVSGELACYNNAIQALQKPEMEWQKVEYLMEFGQWLHHRHFPLEDVVFHLRWAVEILLAMKPPGDVPEPQPTPDGEYVAVEMPPRSPVSEAEEAVSLEQLRSVRQLEALARVHILLALVLSPGAEGYEDCCLAAYAFFRHIWQVSLMTAGKSVLENRP 1350 The following BLAST results are available for this feature:
BLAST of TCONS_00060962-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
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