TCONS_00060776-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00060776-protein
Unique Name	TCONS_00060776-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	543

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00060776-protein ID=TCONS_00060776-protein|Name=TCONS_00060776-protein|organism=Clytia hemisphaerica|type=polypeptide|length=543bp
MPTFSWTNLILVLFFGYLFNSIYVIYTLFNPDECDIKKSGRRCLEPSYKL
KDLDDLKVTVFVSRSNVPKQSDLKLIWDSSDGGIKSSTEKKLNVSIPFST
RRNGSLYAYVFLHPSSMSPFDADTSQINYRRHPLTKYAIPKDKTFNLIQG
TKEQKAVKPITHMHTKLAFYLAIQNKTFDRNAIPPDLYHVINLNGNGKYL
PLLHVDGLTTLERHMVPITKNTSEVEIQLYFTPVSLGRMRIWTAVESTLG
NFKSLGFTDKDIDEVKGIFTDTNLYFLGLTFFVALIHMLFDVLAFKNDVS
FWKKKESMAGMSTRTVIWRCVSTSIIFLYLMDEKTSLLVLVPAGIGAIIE
VWKVTKALKIKITFDSWKPSIQFGEKSKSEKETEEFDEQAMKYLSYALYP
LLLAASVYSLVYQPHKSWYSWVVRSLVNGVYAFGFLFMLPQLFVNYKLKS
VAHLPWRAFMYKAFNTFIDDVFAFIITMPTAHRLACFRDDVVFLVYLYQR
WLYPVDKTRTSEYGMSFEEENSKKSDSNDSIEENDTEESKKDR

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_038187	XLOC_038187	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00060776	TCONS_00060776	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR008429	CLPTM1

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008429	Cleft lip and palate transmembrane 1	PFAM	PF05602	CLPTM1	coord: 8..412 e-value: 8.6E-122 score: 407.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 516..543

Blast

[Close]

BLAST of TCONS_00060776-protein vs. Swiss-Prot (Human)
Match: CLP1L (Cleft lip and palate transmembrane protein 1-like protein OS=Homo sapiens GN=CLPTM1L PE=1 SV=1)

HSP 1 Score: 539.65 bits (1389), Expect = 0.000e+0
Identity = 271/539 (50.28%), Postives = 381/539 (70.69%), Query Frame = 0

Query:    5 SWTNLILVLFFGYLFNSIYVIYTLFNPDECDIKKSGRRCLEPSYKLKDLDDLKVTVFVS-RSNVPKQSDLKLIWDSSDGGIKSSTEKKLNVSIPFSTRRNGSLYAYVFLHPSSMSPFDADTSQINYRRHPLTKYAIPKDKTFNLIQGTKEQKAVK-----------PITHMHTKLAFYLAIQNKTFDRNAIPPDLYHVINLNGNGK---YLPLLHVDGLTTLERHMVPITKNTSEVEIQLYFTPVSLGRMRIWTAVESTLGNFKSLGFTDKDIDEVKGIFTDTNLYFLGLTFFVALIHMLFDVLAFKNDVSFWKKKESMAGMSTRTVIWRCVSTSIIFLYLMDEKTSLLVLVPAGIGAIIEVWKVTKALKIKITFDSWKPSIQFGEKSKSEKETEEFDEQAMKYLSYALYPLLLAASVYSLVYQPHKSWYSWVVRSLVNGVYAFGFLFMLPQLFVNYKLKSVAHLPWRAFMYKAFNTFIDDVFAFIITMPTAHRLACFRDDVVFLVYLYQRWLYPVDKTRTSEYGMSFEEENSKKSDSN 528
            S+T+L++ +F  Y+ ++ +V+Y +     C        C++P   L     L+++V+ + RS++  ++++ L+ +  D  ++S  E+ +NVS+P  TR NG+LYAY+FLH + + P+  D  Q++    PLT Y +PK +  NL+ G  + + ++           P++H   +LA  +   N  FD +++P D++  + +   GK   YLP+L +D L+   + ++ I ++T+E+ + + +  VSLGR+R W  ++  + + +  GF++KD DEVKGIF DTNLYFL LTFFVA  H+LFD LAFKND+SFWKKK+SM GMST+ V+WRC ST +IFL+L+DE+TSLLVLVPAG+GA IE+WKV KALK+ I +    P  QFG  S+SE++TEE+D QAMKYLSY LYPL +  +VYSL+   +KSWYSW++ S VNGVYAFGFLFMLPQLFVNYKLKSVAHLPW+AF YKAFNTFIDDVFAFIITMPT+HRLACFRDDVVFLVYLYQRWLYPVDK R +E+G S+EE+ ++   ++
Sbjct:    7 SFTSLVVGVFVVYVVHTCWVMYGIVYTRPCS---GDANCIQPY--LARRPKLQLSVYTTTRSHLGAENNIDLVLNVEDFDVESKFERTVNVSVPKKTRNNGTLYAYIFLHHAGVLPWH-DGKQVHLVS-PLTTYMVPKPEEINLLTGESDTQQIEAEKKPTSALDEPVSHWRPRLALNVMADNFVFDGSSLPADVHRYMKMIQLGKTVHYLPILFIDQLSNRVKDLMVINRSTTELPLTVSYDKVSLGRLRFWIHMQDAVYSLQQFGFSEKDADEVKGIFVDTNLYFLALTFFVAAFHLLFDFLAFKNDISFWKKKKSMIGMSTKAVLWRCFSTVVIFLFLLDEQTSLLVLVPAGVGAAIELWKVKKALKMTIFWRGLMPEFQFGTYSESERKTEEYDTQAMKYLSYLLYPLCVGGAVYSLLNIKYKSWYSWLINSFVNGVYAFGFLFMLPQLFVNYKLKSVAHLPWKAFTYKAFNTFIDDVFAFIITMPTSHRLACFRDDVVFLVYLYQRWLYPVDKRRVNEFGESYEEKATRAPHTD 538

The following BLAST results are available for this feature:

BLAST of TCONS_00060776-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00060776-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CLP1L	0.000e+0	50.28	Cleft lip and palate transmembrane protein 1-like ...	[more]

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TCONS_00060776-protein (polypeptide) - C. hemisphaerica