TCONS_00060420-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00060420-protein
Unique Name	TCONS_00060420-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	670

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00060420-protein ID=TCONS_00060420-protein|Name=TCONS_00060420-protein|organism=Clytia hemisphaerica|type=polypeptide|length=670bp
MRNYIDRILLKINEGRDPAALGVLRFCYGLLMIIDIFDERGLSRLPIKHG
DPSSCYFPLFDNMPRLSIEYLYLVYLVLLMSAFGIMIGMFFKLSCFCFMS
CYWYIFFLDKTVWNNHSYLYGLISIILLLSNANYYWSIDGLIWPSIRNKQ
IPLWQYGVVRFQVFLLYFYAGLKKLDRDWMTGYSMVGLSREFVFDPFRSF
LTNEQIDFYMVHCCGLMFDLVQGFMLFFDTTRPIGFFFGYNFHIMNAVMF
NIGMFSYMCMAVIPIFCRPEWPKKIIKMLPSFLQKVLPMTEDSVDNKSCT
LIEQPPSKKKKLKPRSWTWNNLFMNLLCLHYVAAQLFLPYSHFLTKGYNS
WTQGLYGYSWDMMIHSWSTQHVVVKVTDQITNKEQYLRPGAFFPYGDSKN
RIFSHPDMLKQYATCLADRVKGMDELGIQHPQITVDVWKSMNGRYQQRML
DPTVDLVTAEWDPFTHTKWMQPLLVELSSWRSTLKQIRNANFEVNNATEI
VFVADFPGLSLENYIAPEIKANVTVLKGEVIVQSEHDHNTTVKVNETLNL
ASDETHVIHTVTNDPSCYMYVYYNESWVDKTDEELLASDTEYQKKLESAK
KWKEMPVYEKFYTFMKKKVMNMKYGLQQIHMAMNIIIEDLTELEMYPRED
AHEGDWEGEGRGKGKHDDEL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_037999	XLOC_037999	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00060420	TCONS_00060420	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011020	HTTM
IPR007782	VKG_COase

Vocabulary: **Molecular Function**
Term	Definition
GO:0008488	gamma-glutamyl carboxylase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0017187	peptidyl-glutamic acid carboxylation

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0017187	peptidyl-glutamic acid carboxylation
molecular_function	GO:0008488	gamma-glutamyl carboxylase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011020	HTTM	SMART	SM00752	EBI_submitted	coord: 13..271 e-value: 1.5E-82 score: 290.3
IPR007782	Vitamin K-dependent gamma-carboxylase	PFAM	PF05090	VKG_Carbox	coord: 23..472 e-value: 3.1E-149 score: 497.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 651..670

Blast

[Close]

BLAST of TCONS_00060420-protein vs. Swiss-Prot (Human)
Match: VKGC (Vitamin K-dependent gamma-carboxylase OS=Homo sapiens GN=GGCX PE=1 SV=2)

HSP 1 Score: 524.628 bits (1350), Expect = 7.434e-178
Identity = 271/598 (45.32%), Postives = 386/598 (64.55%), Query Frame = 0

Query:    7 RILLKINEGRDPAALGVLRFCYGLLMIIDIFDERGLSRLPIKHGDP-SSCYFPLFDNMPRLSIEYLYLVYLVLLMSAFGIMIGMFFKLSCFCFMSCYWYIFFLDKTVWNNHSYLYGLISIILLLSNANYYWSIDGLIWPSIRNKQIPLWQYGVVRFQVFLLYFYAGLKKLDRDWMTGYSMVGLSREFVFDPFRSFLTNEQIDFYMVHCCGLMFDLVQGFMLFFDTTRPIGFFFGYNFHIMNAVMFNIGMFSYMCMAVIPIFCRPEWPKKIIKMLPSFLQKVLPMTEDSVDNKSCTLIEQPPSKKKKLKPRSWTWNNLFMNLLCLHYVAAQLFLPYSHFLTKGYNSWTQGLYGYSWDMMIHSWSTQHVVVKVTDQITNKEQYLRPGAFFPYGDSKNRIFSHPDMLKQYATCLADRVKGMDELGIQHPQITVDVWKSMNGRYQQRMLDPTVDLVTAEWDPFTHTKWMQPLLVELSSWRSTLKQIRNANFEVNNATEIVFVADFPGLSLENYIAPEI-KANVTVLKGEVIVQ-SEHDHNTTVKVNETLNLASDETHVIHTVTNDPSCYMYVYYNESWVDKTDEELLASDTEYQKKLESAKK 601
            R++  +N   DPA+L V RF +G LM++DI  ERGLS L  K+ D    C FPL D +  L ++++YLVY ++ + A G+M+G+ +++SC  F+  YWY+F LDKT WNNHSYLYGL++  L   +AN+YWS+DGL+    RN  +PLW Y V+R Q+F++YF AG+KKLD DW+ GYSM  LSR ++F PF+  L+ E     +VH  GL+ DL  GF+LFFD +R IG FF   FH MN+ +F+IGMFSY+ +A  P+FC PEWP+K++   P  LQ++LP+      + SC  + +    K   KP      +       L Y+  QLFLPYSHFLT+GYN+WT GLYGYSWDMM+HS S QHV +   D  T +  YL PG F        R   H DMLKQYATCL+   + + +  +  PQI  D+W S+N R+QQR+ DP VD+V A W PF  T W+QPLL++LS WR+ L++I+++   ++N TE+VF+ADFPGL LEN+++ ++   ++ +L+GEV V+      N T++  E + L + E H ++T +  PSCYMYVY N +  +   E+ LA   E ++K+E+  +
Sbjct:   50 RLVTLLNRPTDPASLAVFRFLFGFLMVLDIPQERGLSSLDRKYLDGLDVCRFPLLDALRPLPLDWMYLVYTIMFLGALGMMLGLCYRISCVLFLLPYWYVFLLDKTSWNNHSYLYGLLAFQLTFMDANHYWSVDGLLNAHRRNAHVPLWNYAVLRGQIFIVYFIAGVKKLDADWVEGYSMEYLSRHWLFSPFKLLLSEELTSLLVVHWGGLLLDLSAGFLLFFDVSRSIGLFFVSYFHCMNSQLFSIGMFSYVMLASSPLFCSPEWPRKLVSYCPRRLQQLLPLKAAPQPSVSC--VYKRSRGKSGQKP---GLRHQLGAAFTLLYLLEQLFLPYSHFLTQGYNNWTNGLYGYSWDMMVHSRSHQHVKITYRDGRTGELGYLNPGVF----TQSRRWKDHADMLKQYATCLS---RLLPKYNVTEPQIYFDIWVSINDRFQQRIFDPRVDIVQAAWSPFQRTSWVQPLLMDLSPWRAKLQEIKSS---LDNHTEVVFIADFPGLHLENFVSEDLGNTSIQLLQGEVTVELVAEQKNQTLREGEKMQLPAGEYHKVYTTSPSPSCYMYVYVNTT--ELALEQDLAYLQELKEKVENGSE 630

The following BLAST results are available for this feature:

BLAST of TCONS_00060420-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00060420-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
VKGC	7.434e-178	45.32	Vitamin K-dependent gamma-carboxylase OS=Homo sapi...	[more]

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TCONS_00060420-protein (polypeptide) - C. hemisphaerica