TCONS_00060419-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00060419-protein
Unique NameTCONS_00060419-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length315

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00060419-protein ID=TCONS_00060419-protein|Name=TCONS_00060419-protein|organism=Clytia hemisphaerica|type=polypeptide|length=315bp
MKGLIILLSVISPGFMQIANDISRLKAEVKVLSSKLSDTDHNLSITDQKL
SQQITQLSQQLSQKNQQLNQATLKIHQLEFLKTKILIQDGYCRIKTASCG
NCFCQEDYNLAEKFYCDCRNKPKRRDCKEHYANGERINGVYLISNNVQGA
STQVFCDHTTGSGGWTVIQRRVDGSTNFQRDWKSYKNGFGHLQREFWLGN
ENIYLLTRQALLTGSTVRFELIRRSSGRKLWAEYSTFELGNEGTKYQLKL
RGYRGNVRDLXAKVYAREIYFSVKFAKVNVVNFAIFRPRESFCSREFVRL
IKSNLESFFIRFFPF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037998XLOC_037998Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00060419TCONS_00060419Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002181Fibrinogen_a/b/g_C_dom
IPR014716Fibrinogen_a/b/g_C_1
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 47..74
NoneNo IPR availableGENE3D3.90.20.10coord: 8..84
e-value: 0.0013
score: 18.3
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSMARTSM00186FBG_2coord: 122..283
e-value: 1.3E-22
score: 91.1
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPFAMPF00147Fibrinogen_Ccoord: 124..260
e-value: 2.3E-41
score: 141.9
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPROSITEPS51406FIBRINOGEN_C_2coord: 118..259
score: 31.42
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 122..267
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 118..267
e-value: 4.5E-46
score: 155.8

Blast
[Close]
BLAST of TCONS_00060419-protein vs. Swiss-Prot (Human)
Match: FGL2 (Fibroleukin OS=Homo sapiens GN=FGL2 PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 1.597e-33
Identity = 85/259 (32.82%), Postives = 135/259 (52.12%), Query Frame = 0 
Query:    5 IILLSVISPGFMQIANDISRLKAEVKVLSSKLSDTDHNLSITDQKLSQQITQLSQQLSQKNQQLNQATLKIHQLEFLKTKILIQDGYCRIKTASCGNCFCQEDYNLAEKFYCDCRNKPKR----RDCKEHYANGERINGVYLISNNVQGASTQVFCDHTTGSGGWTVIQRRVDGSTNFQRDWKSYKNGFGHLQREFWLGNENIYLLTRQALLTGSTVRFELIRRSSGRKLWAEYSTFELGNEGTKYQLKLRGYRGNVRD 259
            ++L S  +PG +   N +  L++EV  LSS+L +    +++   +L +        L   N   N    K+  L F+   +   DG        C  C  QE            +++P +    +DC ++YA G+R +  Y ++ + + +S +V+CD  T  GGWTV+Q R+DGSTNF R W+ YK GFG+L+REFWLGN+ I+LLT+   +    +R +L    +G +L+A Y  F + NE  KY+L +  Y G   D
Sbjct:  114 LLLPSTGAPGEVG-DNRVRELESEVNKLSSELKNAKEEINVLHGRLEKL------NLVNMNNIENYVDSKVANLTFVVNSL---DG-------KCSKCPSQEQ----------IQSRPVQHLIYKDCSDYYAIGKRSSETYRVTPDPKNSSFEVYCDMETMGGGWTVLQARLDGSTNFTRTWQDYKAGFGNLRREFWLGNDKIHLLTKSKEM---ILRIDL-EDFNGVELYALYDQFYVANEFLKYRLHVGNYNGTAGD 341
The following BLAST results are available for this feature:
BLAST of TCONS_00060419-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FGL21.597e-3332.82Fibroleukin OS=Homo sapiens GN=FGL2 PE=1 SV=1[more]
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