TCONS_00060183-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00060183-protein
Unique NameTCONS_00060183-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length258

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00060183-protein ID=TCONS_00060183-protein|Name=TCONS_00060183-protein|organism=Clytia hemisphaerica|type=polypeptide|length=258bp
MTKCCCQVQQRYVFIIFAHFGFFLIYASRMNLSVVLVAMVNSTYAHVKPS
NDPECQRIAGNTTIPHNNGRFNWDQSQQGVILSSFFYGYILTQIFGGWVS
LRYGGRKVFGWSLMATSILTLLTPVASRISYFCLVTVRVLEGIVQGGLFS
ALNQLVSQWVPQTQVTSFFVVVYTGLQSGSVVALSTSGYLADSSYGWPSS
FYLYGGLSFIVSVLWFIFVYDSPSQHPFISDEEXYLFTIHHLSILSYLMK
KGPTYRNM
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037858XLOC_037858Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00060183TCONS_00060183Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011701MFS
IPR020846MFS_dom
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1250.20coord: 6..235
e-value: 1.5E-30
score: 105.5
IPR011701Major facilitator superfamilyPFAMPF07690MFS_1coord: 20..234
e-value: 1.4E-36
score: 126.0
IPR020846Major facilitator superfamily domainPROSITEPS50850MFScoord: 14..258
score: 23.479
IPR020846Major facilitator superfamily domainCDDcd06174MFScoord: 71..219
e-value: 2.04886E-18
score: 80.8209
IPR020846Major facilitator superfamily domainSUPERFAMILY103473MFS general substrate transportercoord: 10..41
coord: 70..235

Blast
[Close]
BLAST of TCONS_00060183-protein vs. Swiss-Prot (Human)
Match: S17A5 (Sialin OS=Homo sapiens GN=SLC17A5 PE=1 SV=2)

HSP 1 Score: 159.458 bits (402), Expect = 8.959e-46
Identity = 87/237 (36.71%), Postives = 131/237 (55.27%), Query Frame = 0 
Query:    5 CCQVQQRYVFIIFAHFGFFLIYASRMNLSVVLVAMVNSTYAHVKPSNDPECQRIAGNTTIPHNN--GRFNWDQSQQGVILSSFFYGYILTQIFGGWVSLRYGGRKVFGWSLMATSILTLLTPVASRISYFCLVTVRVLEGIVQGGLFSALNQLVSQWVPQTQVTSFFVVVYTGLQSGSVVALSTSGYLADSSYGWPSSFYLYGGLSFIVSVLWFIFVYDSPSQHPFISD-EEXYLFT 238
            CC    RY   I A FGFF++YA R+NLSV LV MV+S            C   +    + HN    ++ WD   QG IL SFFYGYI+TQI GG+V+ + GG+ + G+ ++ T++LTL TP+A+ +    L+ +R LEG+ +G  F A++ + S W P  + +    + Y G Q G+V++L  SG +      W   FY +G +     +LW   V D+P +H  IS  E+ Y+ +
Sbjct:   35 CCSA--RYNLAILAFFGFFIVYALRVNLSVALVDMVDSNTTLEDNRTSKACPEHSAPIKVHHNQTGKKYQWDAETQGWILGSFFYGYIITQIPGGYVASKIGGKMLLGFGILGTAVLTLFTPIAADLGVGPLIVLRALEGLGEGVTFPAMHAMWSSWAPPLERSKLLSISYAGAQLGTVISLPLSGIIC-YYMNWTYVFYFFGTIGIFWFLLWIWLVSDTPQKHKRISHYEKEYILS 268
The following BLAST results are available for this feature:
BLAST of TCONS_00060183-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
S17A58.959e-4636.71Sialin OS=Homo sapiens GN=SLC17A5 PE=1 SV=2[more]
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