TCONS_00060100-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00060100-protein
Unique NameTCONS_00060100-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length244

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00060100-protein ID=TCONS_00060100-protein|Name=TCONS_00060100-protein|organism=Clytia hemisphaerica|type=polypeptide|length=244bp
METIRKKLGGMKKQLEKALAEAKAAEDELAETNAKADAVDEQVSKVLEEL
GLIEDKLDETESKMSSTEKSLNETEKKQDEVERSKNMLENRNSQESQKAD
KLQSDLDELNSKNAELVEKLDAITKESDDLENTLDEEEERAANADARVKE
LETEVLQVGNLLRTMEISEDKANQREDAVTTKIAETTSQLEEATAKAEKY
ETQAAELDRQQDELEDSLSNEKENYNKVKREYESTLAEIQEMSV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037813XLOC_037813Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00060100TCONS_00060100Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000533Tropomyosin
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1..154
NoneNo IPR availableCOILSCoilCoilcoord: 183..244
NoneNo IPR availableGENE3D1.20.5.340coord: 131..199
e-value: 1.7E-8
score: 33.9
coord: 1..79
e-value: 3.8E-8
score: 32.8
coord: 80..130
e-value: 0.0018
score: 17.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 123..146
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 185..226
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..110
NoneNo IPR availableSUPERFAMILY57997Tropomyosincoord: 2..242
IPR000533TropomyosinPRINTSPR00194TROPOMYOSINcoord: 42..59
score: 25.57
coord: 133..156
score: 36.37
coord: 78..98
score: 36.34
coord: 189..214
score: 35.44
IPR000533TropomyosinPFAMPF00261Tropomyosincoord: 6..241
e-value: 1.4E-31
score: 109.7

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00060100-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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