TCONS_00060094-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00060094-protein
Unique NameTCONS_00060094-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length533

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00060094-protein ID=TCONS_00060094-protein|Name=TCONS_00060094-protein|organism=Clytia hemisphaerica|type=polypeptide|length=533bp
MTTEQTEEVHLNNDNDNDNDEKERRSQYQYRWYNINPKAFPAKCSYFFEK
ARVVGFSPNLVMFLTSIGLNKAEAGFIGGLKMVGMLSGGIFWGYIADKWH
CHRTIVLCTCVMSLMSILTQPLIGLHYGNAETNKCPTSVSMGNTNASVSI
LKDCVGDENCTFANTTERPILPRFANNATKKSPDTKLDSRFNSFFVAMLL
INIAIAFAEANSTSFIDTGTLRQSQLSKDRPIVFGRQRMFGSFGSGFGIL
ASNIAVDYFPESNITCYTGIFVVYALFTCLCCFFTLLLYRGLSFRKDANG
EDPVDAEDAPLQETVGKKPEDGETKGFNKLLLKTILRHDVLFFYATTLIS
GLQYSQVLSFLFPYLKEMDGSSIHMTLSIVLPAISASVGFAFCKEIINIL
GGTWNSILFSFAMYFLRYFTMGFMESAWLVVAVQVLHCFSTTLFQAAGLN
HLKETSPLPIMTTMISLFNTLLFGVGTIIGSSLSGVVYERYGGRVMYKGT
GLLALAWFCVSVIYVALIRKQKKLMAEDEHHEM
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037809XLOC_037809Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00060094TCONS_00060094Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024989MFS_assoc_dom
IPR020846MFS_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024989Major facilitator superfamily associated domainPFAMPF12832MFS_1_likecoord: 43..497
e-value: 1.3E-47
score: 162.4
NoneNo IPR availableGENE3D1.20.1250.20coord: 32..302
e-value: 4.8E-23
score: 81.0
NoneNo IPR availableGENE3D1.20.1250.20coord: 329..532
e-value: 4.7E-15
score: 54.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 302..321
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
IPR020846Major facilitator superfamily domainPROSITEPS50850MFScoord: 339..533
score: 10.123
IPR020846Major facilitator superfamily domainCDDcd06174MFScoord: 56..515
e-value: 2.6981E-13
score: 68.8797
IPR020846Major facilitator superfamily domainSUPERFAMILY103473MFS general substrate transportercoord: 39..123
coord: 186..524

Blast
[Close]
BLAST of TCONS_00060094-protein vs. Swiss-Prot (Human)
Match: MFSD6 (Major facilitator superfamily domain-containing protein 6 OS=Homo sapiens GN=MFSD6 PE=1 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 1.762e-19
Identity = 80/336 (23.81%), Postives = 146/336 (43.45%), Query Frame = 0 
Query:  192 NSFFVAMLLINIAIAFAEANSTSFIDTGTLRQSQLSKDRPIVFGRQRMFGSFGSGFGILASNIAVDYF-------------PESNITCYTGIFVVYA-LFTCLCCFFTLLLYRGLSFRKDANGEDPVDAEDAPLQETVGKKPEDGETKGFNKL--------LLKTILRHDVLFFYATTLISGLQYSQVLSFLFPYLKEMDGSSIHMTLSIVLPAISASVGFAFCKEIINILGGTWNSILFSFAMYFLRYFTMGFMESAWLVVAVQVLHCFSTTLFQAAGLNHLKETSPLPIMTTMISLFNTLLFGVGTIIGSSLSGVVYERYGGRVMYKGTGLLAL 505
             + F+ +L++ I   F  A+S + +DT TL+     +DR   +G QRM+GS G G  +L+  I +DY              PE     Y  +F+V+  L T      T   +R   F+ D +    V+        +     E   T   ++         LL ++    VLF        G  Y  V +FL+ +L++++G++    +  VL  +S    + F  ++I ++G     +    A    RY  + ++E+AW V+ ++VL   +     AA +++L    P  + T+   +   L  G+G   G+ + GV+   +G    ++G G+  L
Sbjct:  285 EAIFLVILVVVIIGEFFSASSVTIVDTVTLQYLGKHRDR---YGLQRMWGSLGWGLAMLSVGIGIDYTHIEVLIDGKGCKPPEYR--NYQIVFIVFGVLMTMALIVATQFRFRYNHFKNDDSKGKEVEIPQVERNNSTESSEETPTTTSHSQAFNFWDLIKLLCSVQYGSVLF---VAWFMGFGYGFVFTFLYWHLEDLNGTTTLFGVCSVLSHVSELTAYFFSHKLIELIGHI-RVLYIGLACNTARYIYISYLENAWTVLPMEVLQGVTHAAIWAACISYLSAAVPPELRTSAQGILQGLHLGLGRGCGAMIGGVLVNYFGAAATFRGIGMACL 611
The following BLAST results are available for this feature:
BLAST of TCONS_00060094-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MFSD61.762e-1923.81Major facilitator superfamily domain-containing pr... [more]
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