TCONS_00060008-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00060008-protein
Unique NameTCONS_00060008-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length627

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00060008-protein ID=TCONS_00060008-protein|Name=TCONS_00060008-protein|organism=Clytia hemisphaerica|type=polypeptide|length=627bp
CWPSGDDWEGLNKTLNGNLKDPVNPISACFKPAGETDAMSKEREAECSQQ
LQDFKSDPYWVRKHSGLTQSAGQVGAWNSTESVKVVEARTVAHIKTAVDF
ARKHNMRIVVKGTGHEYNGRSNAPDSLLIWTYHMSEIIFHDQLSWDCPAC
KDEKVTSVTVGAGVVWGDIYAAANRKNLYVQGGTCPTVGVVGFTLGGGIG
IWSRKYGLGSTNLLQATVVTADGDIKRASKVENPELYYALRGGGFGFGIV
ADMTIRTHPSPKQVILVKGDISTYCESSFKKLLAHFFTIYKEDLVGPHWG
DYARVKVPGKHSGEKYKWVLSINMKAVDISLETAKREWASFIRFVSIGDL
SHMYKFEKSKYDVLKFLTMPGNTFWSRANPGTVPTLQDEFEPHAAYNWGT
ELDKGSEQFKYWLQFGTRNLRNDQILTDPTTGADKLITFFKELGDLPSTA
RLSMVFKGEDNIFNCASNELANTPMARMNESFAMIWAWVGVRRFHPDIPI
SLQKDSKNTTYTEIKDEFCKGNSLEACPASKKVQKAFQKFREATPGAGSY
FNIADYFEKDFKEAFWGKEIYKKLRKLKDKYDPHGLFYCHHCVGSEDWEY
KSEKLCKKGPANEETAQKAPTPNNEEL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037760XLOC_037760Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00060008TCONS_00060008Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006094Oxid_FAD_bind_N
IPR016167FAD-bd_2_sub1
IPR016169CO_DH_flavot_FAD-bd_sub2
IPR012951BBE
IPR016166FAD-bd_2
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0050660flavin adenine dinucleotide binding
GO:0003824catalytic activity
GO:0016614oxidoreductase activity, acting on CH-OH group of donors
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0003824 catalytic activity
molecular_function GO:0050660 flavin adenine dinucleotide binding
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0016614 oxidoreductase activity, acting on CH-OH group of donors
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006094FAD linked oxidase, N-terminalPFAMPF01565FAD_binding_4coord: 85..228
e-value: 3.9E-26
score: 91.4
IPR016167FAD-binding, type 2, subdomain 1GENE3D3.30.43.10coord: 44..135
e-value: 4.7E-16
score: 58.3
IPR016169CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2GENE3D3.30.465.10coord: 151..287
e-value: 1.1E-33
score: 115.2
IPR012951Berberine/berberine-likePFAMPF08031BBEcoord: 549..591
e-value: 5.8E-8
score: 32.6
IPR016166FAD-binding, type 2PROSITEPS51387FAD_PCMHcoord: 78..260
score: 16.928
IPR016166FAD-binding, type 2SUPERFAMILY56176FAD-binding/transporter-associated domain-likecoord: 82..259

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00060008-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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