TCONS_00059757-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00059757-protein
Unique Name	TCONS_00059757-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	381

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00059757-protein ID=TCONS_00059757-protein|Name=TCONS_00059757-protein|organism=Clytia hemisphaerica|type=polypeptide|length=381bp
MFPPSKKVADDINLERCMRIYPHLQNTGGFFIAVLEKKNDLPWQKSKRVW
KSLPWDECNTKESKLDESEAKSTEQVAENTEETITVEASEDENRGEETAS
DDEPASKQPCIDEESLNKPDESLNKDGESQPTKVKRGAIKEDPYIFLDDS
DKDLSDIRKFYGLSPELPSKQFLVRSTGAIKKRHIYLVSEKVHQVMSENK
HLKIINTGVKIVTRSPFRAGQAEHGVEFRLVQDGLQLVEKFLKNRIVPIR
SGDLVNLISNFEAKTAGFDLETQATMEKIDMGCVVWHLDTSKTKEGEISL
SSDLFLCGHMGRNAVQVMLNKEDRRHYLRLLGVPIPEELGRVVKGPSWGD
QPAKENQQGENTDEKPKDVLEEQKAPAEVAL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_037586	XLOC_037586	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00059757	TCONS_00059757	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001678	MeTrfase_RsmB/NOP2

Vocabulary: **Molecular Function**
Term	Definition
GO:0008168	methyltransferase activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008168	methyltransferase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.150		coord: 3..46 e-value: 7.7E-8 score: 31.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 342..381
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..135
IPR001678	SAM-dependent methyltransferase RsmB/NOP2-type	PROSITE	PS51686	SAM_MT_RSMB_NOP	coord: 1..38 score: 11.977

Blast

[Close]

BLAST of TCONS_00059757-protein vs. Swiss-Prot (Human)
Match: NSUN2 (tRNA (cytosine(34)-C(5))-methyltransferase OS=Homo sapiens GN=NSUN2 PE=1 SV=2)

HSP 1 Score: 153.68 bits (387), Expect = 5.606e-41
Identity = 122/389 (31.36%), Postives = 185/389 (47.56%), Query Frame = 0

Query:    1 MFPPS-KKVADDINLERCMRIYPHLQNTGGFFIAVLEKKNDLPWQK--SKRVWKSLPWDECNTKESKLDESEAKSTEQVA------ENTEETITVEASED-ENRGEETASDDEPASKQPCIDEESLNKPDESLNKDGESQPT---KVKRGAIKEDPYIFLDDSDKDLSDIRKFYGLSPELPSKQFLVRSTGAIKKRHIYLVSEKVHQVMSENKH-LKIINTGVKIVTRSPFRAGQAEHGVEFRLVQDGLQLVEKFLKNRIVPIRSGDLVNLISNFEAKTAGFDLETQATMEKIDMGCVVWHLDTSKTKEGEISLSSDLFLCGHMGRNAVQVMLNKEDRRHYLRLLGVPIPEELGRVVKGPSWGDQPAKENQQGENTDEKPKDVLEEQKA 375
            MFPP   +    ++LERC+RI PH QNTGGFF+AVL KK+ +PW K   K   KS    E +T+ S  D +E K T+           T +T    A+ED EN G +                           KDG   P    K+K    KEDP++F+ + D     I KFY L P  P    L R+T   KKR +Y+VS+++  V+  N   +K+INTG+K+  R+   +G+ E    FRL Q+G+  +  F+ +RI+ +   D+  L++           ET +  + +  G +V  L          +L   + LCG  G+ +++  + K +R HYLR++G+   E LG   K     +     N+   +T +   DV E Q+A
Sbjct:  392 MFPPKDPEKLQAMHLERCLRILPHHQNTGGFFVAVLVKKSSMPWNKRQPKLQGKSAETRE-STQLSPADLTEGKPTDPSKLESPSFTGTGDTEIAHATEDLENNGSK---------------------------KDGVCGPPPSKKMKLFGFKEDPFVFIPEDDPLFPPIEKFYALDPSFPRMNLLTRTTEG-KKRQLYMVSKELRNVLLNNSEKMKVINTGIKVWCRN--NSGE-EFDCAFRLAQEGIYTLYPFINSRIITVSMEDVKILLTQENPFFRKLSSETYSQAKDLAKGSIV--LKYEPDSANPDALQCPIVLCGWRGKASIRTFVPKNERLHYLRMMGL---EVLGEKKK-----EGVILTNESAASTGQPDNDVTEGQRA 738

The following BLAST results are available for this feature:

BLAST of TCONS_00059757-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00059757-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
NSUN2	5.606e-41	31.36	tRNA (cytosine(34)-C(5))-methyltransferase OS=Homo...	[more]

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TCONS_00059757-protein (polypeptide) - C. hemisphaerica