TCONS_00059721-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00059721-protein
Unique NameTCONS_00059721-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length113

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00059721-protein ID=TCONS_00059721-protein|Name=TCONS_00059721-protein|organism=Clytia hemisphaerica|type=polypeptide|length=113bp
MRSLGQSPTEAELQDMINEVDIDGNGTIDFLEFLGMMARKMRSTDAEEEI
KEAFRVFDKDGNGYISSVELRHIMTTLGEKLTNEEVEEMIKEADMDGDGT
INYEEFVKMIMQK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037566XLOC_037566Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00059721TCONS_00059721Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 85..113
e-value: 1.5E-7
score: 41.1
coord: 12..40
e-value: 6.4E-7
score: 39.0
coord: 49..77
e-value: 4.7E-8
score: 42.8
IPR002048EF-hand domainPFAMPF13833EF-hand_8coord: 1..39
e-value: 2.5E-9
score: 36.6
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 47..110
e-value: 1.3E-16
score: 60.7
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 45..80
score: 17.052
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 81..113
score: 14.458
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 8..43
score: 14.318
IPR002048EF-hand domainCDDcd00051EFhcoord: 49..111
e-value: 1.58108E-21
score: 81.0549
IPR002048EF-hand domainCDDcd00051EFhcoord: 12..75
e-value: 1.80743E-10
score: 51.3945
NoneNo IPR availableGENE3D1.10.238.10coord: 73..113
e-value: 8.9E-22
score: 76.3
NoneNo IPR availableGENE3D1.10.238.10coord: 1..42
e-value: 2.9E-14
score: 52.7
NoneNo IPR availableGENE3D1.10.238.10coord: 43..72
e-value: 1.6E-21
score: 75.4
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 94..106
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 21..33
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 58..70
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 1..112

Blast
[Close]
BLAST of TCONS_00059721-protein vs. Swiss-Prot (Human)
Match: CALM3 (Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.460e-64
Identity = 91/113 (80.53%), Postives = 104/113 (92.04%), Query Frame = 0 
Query:    1 MRSLGQSPTEAELQDMINEVDIDGNGTIDFLEFLGMMARKMRSTDAEEEIKEAFRVFDKDGNGYISSVELRHIMTTLGEKLTNEEVEEMIKEADMDGDGTINYEEFVKMIMQK 113
            MRSLGQ+PTEAELQDMINEVD DGNGTIDF EFL MMARKM+ TD+EEEI+EAFRVFDKDGNGYIS+ ELRH+MT LGEKLT+EEV+EMI+EAD+DGDG +NYEEFV+M+  K
Sbjct:   37 MRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149

HSP 2 Score: 68.9366 bits (167), Expect = 3.644e-16
Identity = 32/65 (49.23%), Postives = 48/65 (73.85%), Query Frame = 0 
Query:   49 EIKEAFRVFDKDGNGYISSVELRHIMTTLGEKLTNEEVEEMIKEADMDGDGTINYEEFVKMIMQK 113
            E KEAF +FDKDG+G I++ EL  +M +LG+  T  E+++MI E D DG+GTI++ EF+ M+ +K
Sbjct:   12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 76
The following BLAST results are available for this feature:
BLAST of TCONS_00059721-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CALM31.460e-6480.53Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1[more]
back to top