TCONS_00059682-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00059682-protein
Unique NameTCONS_00059682-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length570

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00059682-protein ID=TCONS_00059682-protein|Name=TCONS_00059682-protein|organism=Clytia hemisphaerica|type=polypeptide|length=570bp
MSSIISLRTIRRLQKYVPLLSRCHSSLSPQHTDYAYLTEDNIVKSTIQLD
HPVEDLFTFFSKKFQEFGDEVAMIDENTGKSTSYLDLIANGKRLSSFFEQ
KGYQIGDRLAIHTPNCLEYSFATMGSLASGLTLNTVNSAYTNFELKNLLN
SSTPRALVTSSAQLEQARRCIDGTNTDLLICVDDVACNDSGVFNLSDILN
NGDENFNKDLSKLDPNKETAFLLYSSGTTGLPKGVMISHHAFSSNIIQLT
GALEGMLPKKTLCFLPIYHIYGLNYIMMLHLYNRSQLHVVPGFDPVQFLS
LIQEKKIERVSIVPPVAVFLLNHPLVDQYDLSSLRSITVGAAPIDEIAIN
QFNTKFPNVILQQGYGMTETNITHSQCIYPQLQKAGSCGTVLPDVMCKVI
SLDDGEALGPNEQGEVCTGGNQLMTGYYNNEEATRNTIDEEGWVHSGDLG
YYDDDLNFFIIDRLKELIKYKGLQVAPAELEDLLLGHDQITDACVIGVPC
DRTGELPRAYVVKRPDSTLTTKDVEDYVADKLSDHKKLRGGVEFIEQLPK
SAAGKLLRRVLKDQFLNSTK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037554XLOC_037554Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00059682TCONS_00059682Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000873AMP-dep_Synth/Lig
IPR025110AMP-bd_C
IPR020845AMP-binding_CS
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
molecular_function GO:0003824 catalytic activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000873AMP-dependent synthetase/ligasePFAMPF00501AMP-bindingcoord: 62..470
e-value: 4.5E-89
score: 298.9
NoneNo IPR availableGENE3D3.40.50.980coord: 53..227
e-value: 5.2E-29
score: 100.6
NoneNo IPR availableGENE3D2.30.38.10coord: 379..462
e-value: 1.6E-22
score: 78.8
NoneNo IPR availableGENE3D3.30.300.30coord: 463..566
e-value: 5.7E-23
score: 81.2
NoneNo IPR availableGENE3D3.40.50.980coord: 228..378
e-value: 9.3E-42
score: 142.0
NoneNo IPR availableSUPERFAMILY56801Acetyl-CoA synthetase-likecoord: 49..567
IPR025110AMP-binding enzyme, C-terminal domainPFAMPF13193AMP-binding_Ccoord: 479..555
e-value: 1.6E-14
score: 54.5
IPR020845AMP-binding, conserved sitePROSITEPS00455AMP_BINDINGcoord: 222..233

Blast
[Close]
BLAST of TCONS_00059682-protein vs. Swiss-Prot (Human)
Match: ACSF2 (Acyl-CoA synthetase family member 2, mitochondrial OS=Homo sapiens GN=ACSF2 PE=1 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 2.741e-38
Identity = 127/493 (25.76%), Postives = 220/493 (44.62%), Query Frame = 0 
Query:  106 GDRLAIHTPNCLEYSFATMGSLASGLTLNTVNSAYTNFELKNLLNSSTPRALVTSS---------------AQLEQARR-CIDGTNTDLLICVDDVACNDSGVFNLSDILNNGDENFNKD--------LSKLDPNKETAFLLYSSGTTGLPKGVMISHHAF--SSNIIQLTGALEGMLPKKTLCFLP--IYHIYG-LNYIMMLHLYNRSQLHVVPGFDPVQFLSLIQEKKIERVSIVPPVAVFLLNHPLVDQYDLSSLRSITVGAAPIDEIAINQFNTKFPNVILQQGYGMTETN-ITHSQCIYPQ---LQKAGSCGTVLPDVMCKVISLDDGEALGPNEQGEVCTGGNQLMTGYYNNEEATRNTIDEEGWVHSGDLGYYDDDLNFFIIDRLKELIKYKGLQVAPAELEDLLLGHDQITDACVIGVPCDRTGELPRAYVVKRPDSTLTTKDVEDYVADKLSDHKKLRGGVEFIEQLPKSAAGKLLRRVLKDQF 565
            GDRL +  PN   +    + +  +G+ L +VN AY   EL+ +L     +ALV                   ++E A+   +       L  V  V     G   L +++  G    + D        LS  DP      + ++SGTTG PKG  +SH+    +SNI+     L    P++    LP  +YH  G +   MM  +Y  + +   P F+  + L  I  ++   +   P + V +LN P    YD+S++    +  +P     I     K     L   YG TE + +T +   +P+    QKA S G ++P    ++++++ G     N  GE+C  G  +M GY+   + T   +D++ W  +GD+   ++     I+ R K++I   G  + PAELED    H ++ +  V+GV  DR GE   A +  +     T ++++ +   K+S H K+   + F+   P + +GK+ +  L++Q 
Sbjct:  124 GDRLGMWGPNSYAWVLMQLATAQAGIILVSVNPAYQAMELEYVLKKVGCKALVFPKQFKTQQYYNVLKQICPEVENAQPGALKSQRLPDLTTVISVDAPLPGTLLLDEVVAAGSTRQHLDQLQYNQQFLSCHDPIN----IQFTSGTTGSPKGATLSHYNIVNNSNILGERLKLHEKTPEQLRMILPNPLYHCLGSVAGTMMCLMYGATLILASPIFNGKKALEAISRERGTFLYGTPTMFVDILNQPDFSSYDISTMCGGVIAGSPAPPELIRAIINKINMKDLVVAYGTTENSPVTFAH--FPEDTVEQKAESVGRIMPHTEARIMNMEAGTLAKLNTPGELCIRGYCVMLGYWGEPQKTEEAVDQDKWYWTGDVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPKVQEVQVVGVKDDRMGEEICACIRLKDGEETTVEEIKAFCKGKIS-HFKIPKYIVFVTNYPLTISGKIQKFKLREQM 609
The following BLAST results are available for this feature:
BLAST of TCONS_00059682-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ACSF22.741e-3825.76Acyl-CoA synthetase family member 2, mitochondrial... [more]
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