TCONS_00059040-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00059040-protein
Unique NameTCONS_00059040-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length196

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00059040-protein ID=TCONS_00059040-protein|Name=TCONS_00059040-protein|organism=Clytia hemisphaerica|type=polypeptide|length=196bp
MKCLHDKVNIVPVIAKADTLTKKEVKELKQRILREIYENQIQIYQFPEAD
EEEDDEEFIAVNKELKNSVPFAVVGSNTVYEVNGKKVRGRIYPWGVVDIE
NPAHCDFTMLRNMLIRTHMQDLKDVTQDTHYENYRAKKLASGEPLEVSEN
GGGGRASQELDSRDALLMEKEAELRRMQEMIAKMQASMLQQQQNVS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037187XLOC_037187Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00059040TCONS_00059040Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR030379G_SEPTIN_dom
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005525 GTP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 167..194
NoneNo IPR availableGENE3D3.40.50.300coord: 1..195
e-value: 6.6E-7
score: 28.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 142..162
IPR030379Septin-type guanine nucleotide-binding (G) domainPFAMPF00735Septincoord: 1..142
e-value: 3.3E-59
score: 200.3
IPR030379Septin-type guanine nucleotide-binding (G) domainPROSITEPS51719G_SEPTINcoord: 1..141
score: 57.253
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 7..114

Blast
[Close]
BLAST of TCONS_00059040-protein vs. Swiss-Prot (Human)
Match: SEPT2 (Septin-2 OS=Homo sapiens GN=SEPT2 PE=1 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 4.817e-66
Identity = 107/183 (58.47%), Postives = 136/183 (74.32%), Query Frame = 0 
Query:    1 MKCLHDKVNIVPVIAKADTLTKKEVKELKQRILREIYENQIQIYQFPEADEEEDDEEFIAVNKELKNSVPFAVVGSNTVYEVNGKKVRGRIYPWGVVDIENPAHCDFTMLRNMLIRTHMQDLKDVTQDTHYENYRAKKLASGEPLEVSENGGGGRASQELDSRDALLMEKEAELRRMQEMIAK 183
            MK +H+KVNIVPVIAKADTLT KE + LK+RIL EI E+ I+IY  P+A+ +ED E+F    + LK S+PF+VVGSN + E  GKKVRGR+YPWGVV++ENP H DF  LR MLI THMQDL++VTQD HYEN+R+++L            GG +   E  ++D +L+EKEAELRRMQEMIA+
Sbjct:  168 MKAIHNKVNIVPVIAKADTLTLKERERLKKRILDEIEEHNIKIYHLPDAESDED-EDFKEQTRLLKASIPFSVVGSNQLIEAKGKKVRGRLYPWGVVEVENPEHNDFLKLRTMLI-THMQDLQEVTQDLHYENFRSERLKR----------GGRKVENEDMNKDQILLEKEAELRRMQEMIAR 338
The following BLAST results are available for this feature:
BLAST of TCONS_00059040-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SEPT24.817e-6658.47Septin-2 OS=Homo sapiens GN=SEPT2 PE=1 SV=1[more]
back to top