TCONS_00058814-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00058814-protein
Unique NameTCONS_00058814-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length140

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00058814-protein ID=TCONS_00058814-protein|Name=TCONS_00058814-protein|organism=Clytia hemisphaerica|type=polypeptide|length=140bp
MGIDTLKDTRYKRNEDRDKKIPLLNNEDESDDDEELFERSKQAASLNSNS
KIDQVKHELDGAIGVMRNNINKVLDRGDRLEDLEAKSERFEMNAFNFNNS
SRKLSNRMWWQSVKSKLTLALIVIGIVIIVIVSIVMKNKK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037056XLOC_037056Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00058814TCONS_00058814Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001388Synaptobrevin
IPR016444Synaptobrevin/VAMP
Vocabulary: Biological Process
TermDefinition
GO:0016192vesicle-mediated transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016192 vesicle-mediated transport
cellular_component GO:0016021 integral component of membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001388SynaptobrevinPRINTSPR00219SYNAPTOBREVNcoord: 76..95
score: 27.97
coord: 112..131
score: 30.0
coord: 56..75
score: 35.68
IPR001388SynaptobrevinPFAMPF00957Synaptobrevincoord: 48..135
e-value: 2.8E-27
score: 94.2
IPR001388SynaptobrevinPROSITEPS50892V_SNAREcoord: 51..111
score: 16.189
NoneNo IPR availableGENE3D1.20.5.110coord: 9..136
e-value: 1.3E-28
score: 98.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 14..40
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 48..112
IPR016444Synaptobrevin/Vesicle-associated membrane proteinPIRSFPIRSF005409VAMP-5_synaptobrevincoord: 25..140
e-value: 2.0E-28
score: 96.5

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00058814-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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