TCONS_00058811-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00058811-protein
Unique NameTCONS_00058811-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length389

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00058811-protein ID=TCONS_00058811-protein|Name=TCONS_00058811-protein|organism=Clytia hemisphaerica|type=polypeptide|length=389bp
MAEIKALEHSTLIVPYEVLNRTFRTAQKVVDREVSHVTATNDKVRKITSK
NNVPVSEACHELDELIKKLFVLKNKSNDALDQEKSKLTQIQNRVKYLKDQ
SDSKKAIVWKHHRLNRMLVDYFLRNGYYDSAMTLSKTEDIPHLVDIEHFQ
VAKQVEASLKQKNPTICLQWCHSNKSKLKKLQSTLELNVRIQEFVELVKS
GMRKDALVYARKYFSGKGPDSLAVPEIQKTVMALLAFRPDTEIKRYKDLF
DSARWNLLVEQFRKENLALYQLSAQSTLEIVLQSGLASMKTPHCFHKDEQ
KRDCPVCNRLFNKLAKPLPFAHSSHSRLLCHHTGEQMNEHNPPMMLPNGH
VYSESAIVRLSSMSDDEMIVCPRTKSLFSNDEVKKIYIM
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037054XLOC_037054Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00058811TCONS_00058811Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013144CRA_dom
IPR006595CTLH_C
IPR013083Znf_RING/FYVE/PHD
IPR024964CTLH/CRA
IPR006594LisH
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 73..100
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 325..388
IPR013144CRA domainSMARTSM00757toby_final6coord: 201..298
e-value: 1.8E-12
score: 57.4
IPR006595CTLH, C-terminal LisH motifSMARTSM00668ctlhcoord: 148..205
e-value: 1.9E-6
score: 37.4
IPR006595CTLH, C-terminal LisH motifPROSITEPS50897CTLHcoord: 148..205
score: 10.548
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 285..389
e-value: 0.0016
score: 17.4
IPR024964CTLH/CRA C-terminal to LisH motif domainPFAMPF10607CLTHcoord: 149..291
e-value: 6.2E-27
score: 94.2
IPR006594LIS1 homology motifPROSITEPS50896LISHcoord: 110..142
score: 8.981

Blast
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BLAST of TCONS_00058811-protein vs. Swiss-Prot (Human)
Match: MAEA (Macrophage erythroblast attacher OS=Homo sapiens GN=MAEA PE=1 SV=1)

HSP 1 Score: 352.443 bits (903), Expect = 1.102e-119
Identity = 177/391 (45.27%), Postives = 260/391 (66.50%), Query Frame = 0 
Query:    4 IKALEHSTLIVPYEVLNRTFRTAQKVVDREVSHVTATNDKVRKITSKNNVP-VSEACHELDELIKKLFVLKNKSNDALDQEKSKLTQIQNRVKYLKDQSDSKKAI--VWKHHRLNRMLVDYFLRNGYYDSAMTLSKTEDIPHLVDIEHFQVAKQVEASLKQKNPTICLQWCHSNKSKLKKLQSTLELNVRIQEFVELVKSGMRKDALVYARKYFSGKGPDSLAVPEIQKTVMALLAFRPDTEIKRYKDLFDSARWNLLVEQFRKENLALYQLSAQSTLEIVLQSGLASMKTPHCFHKDEQKR--DCPVCNRLFNKLAKPLPFAHSSHSRLLCHHTGEQMNEHNPPMMLPNGHVYSESAIVRLSSMSDDEMIVCPRTKSLFSNDEVKKIYIM 389
            +K  E+ TL VPYE LN+ FR AQK +DRE SHVT    ++ K  S    P V      LD +++KL VLK K+ +++  E       + R+++LK+ S  + A   VWK  R++RM+V++ LR GYY++A+ L++   I  LV+IE F  AK+VE SL+++    CL WCH NKS+L+K++S LE ++RIQEF+EL++   R DA+ +ARK+FS      L   E+++  M +LAF PDT I  YKDL D ARW +L++QFR +N  L+QL   S   + LQ+GL+++KTP C+ +D   +  DCPVC+R  NKLA+PLP AH ++SRL+C  +G+ MNE+NPPMMLPNG+VY  ++++   S+  D+ +VCPRTK +F   + +K+YIM
Sbjct:   14 LKVQEYPTLKVPYETLNKRFRAAQKNIDRETSHVTMVVAELEKTLS--GCPAVDSVVSLLDGVVEKLSVLKRKAVESIQAEDESAKLCKRRIEHLKEHSSDQPAAASVWKRKRMDRMMVEHLLRCGYYNTAVKLARQSGIEDLVNIEMFLTAKEVEESLERRETATCLAWCHDNKSRLRKMKSCLEFSLRIQEFIELIRQNKRLDAVRHARKHFSQAEGSQL--DEVRQA-MGMLAFPPDTHISPYKDLLDPARWRMLIQQFRYDNYRLHQLGNNSVFTLTLQAGLSAIKTPQCYKEDGSSKSPDCPVCSRSLNKLAQPLPMAHCANSRLVCKISGDVMNENNPPMMLPNGYVYGYNSLL---SIRQDDKVVCPRTKEVFHFSQAEKVYIM 396
The following BLAST results are available for this feature:
BLAST of TCONS_00058811-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MAEA1.102e-11945.27Macrophage erythroblast attacher OS=Homo sapiens G... [more]
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