TCONS_00057903-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00057903-protein
Unique NameTCONS_00057903-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length137

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00057903-protein ID=TCONS_00057903-protein|Name=TCONS_00057903-protein|organism=Clytia hemisphaerica|type=polypeptide|length=137bp
MYQREQSVYKQYLVEEEKFLKNLEKNVQDHINRLKVEELTLLKLISSASN
NVDGDEEENTSSQESPNDVADHELSDGISNQNYKQELQVNTIPIDLGLDT
AIFKVELNETKQSGVVETICEEEDDKSESDSEHDSDN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036510XLOC_036510Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00057903TCONS_00057903Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029138SNAPC5
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006384transcription initiation from RNA polymerase III promoter
GO:0006366transcription from RNA polymerase II promoter
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006366 transcription from RNA polymerase II promoter
biological_process GO:0006384 transcription initiation from RNA polymerase III promoter
cellular_component GO:0005634 nucleus
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 13..40
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..82
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 113..137
IPR029138snRNA-activating protein complex subunit 5PFAMPF15497SNAPc19coord: 13..117
e-value: 1.2E-8
score: 35.2

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00057903-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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