TCONS_00055227-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00055227-protein
Unique Name	TCONS_00055227-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	326

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00055227-protein ID=TCONS_00055227-protein|Name=TCONS_00055227-protein|organism=Clytia hemisphaerica|type=polypeptide|length=326bp
MDEGEDIQEYHSETLESKFFAPFANIPYVSNVHYARPSDVFIPKGYFQNI
EEIKNFEFFEDDTVICGFLKTGTNWCERIVWALRNDIKLNIQHAPPVSVF
DIVMGIGDFDSDNNKANDEIFSSMKRPRVIKMHLSYELLPRQFQQKQPKM
IYMLRNPRDVCQSLHGHFYTLYDDFSGSLQDVVNLMTDDAGCYSGPFFRH
VLGYWKRRSYENILIIFYEEMKKDLSGHIKKIADFLDIKISDEEVSNLAK
HFSFDSMKRKAEQMIPFHAKQEGHSSTVEAAHKGKTMFNKGQAGSWKALF
TPEMTKQMEEWESKWLRDTDLELIYE

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_034783	XLOC_034783	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00055227	TCONS_00055227	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000863	Sulfotransferase_dom
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0008146	sulfotransferase activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008146	sulfotransferase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000863	Sulfotransferase domain	PFAM	PF00685	Sulfotransfer_1	coord: 61..319 e-value: 7.9E-49 score: 166.4
None	No IPR available	GENE3D	3.40.50.300		coord: 2..326 e-value: 1.7E-57 score: 194.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 33..325

Blast

[Close]

BLAST of TCONS_00055227-protein vs. Swiss-Prot (Human)
Match: ST1B1 (Sulfotransferase family cytosolic 1B member 1 OS=Homo sapiens GN=SULT1B1 PE=1 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 1.206e-27
Identity = 77/259 (29.73%), Postives = 122/259 (47.10%), Query Frame = 0

Query:   45 GYFQNIEEIKNFEFFEDDTVICGFLKTGTNWCERIVWALRNDIKLNIQHAPPVSVFDIVMGIGDFDSDNNKANDEIFSSMKRPRVIKMHLSYELLPRQFQQKQPKMIYMLRNPRDVCQSLHGHFYTLYD--DFSGSLQDVVNLMTDDAGCYSGPFFRHVLGYWKRRSYENILIIFYEEMKKDLSGHIKKIADFLDIKISDEEVSNLAKHFSFDSMKRKAEQMIPFHAKQEGHSSTVEAAHKGKTMFNKGQAGSWKALFT 301
             +  N E+I+ F    DD VI  + K+GT W   I+  + ND   +I+      + + V  +         +  E       PR++K HL  +LLP+ F +   KMIY+ RN +DV  S + HF  + +   F G+ ++ +         Y G +F HV  +WK++    IL ++YE+MK++    IKKI  FL+  ++DE +  +  H SF+ MK     ++ +      H  T    H       KG AG WK  FT
Sbjct:   23 AFASNWEKIEQFHSRPDDIVIATYPKSGTTWVSEIIDMILND--GDIEKCKRGFITEKVPMLEMTLPGLRTSGIEQLEKNPSPRIVKTHLPTDLLPKSFWENNCKMIYLARNAKDVSVSYY-HFDLMNNLQPFPGTWEEYLEKFLTGKVAY-GSWFTHVKNWWKKKEEHPILFLYYEDMKENPKEEIKKIIRFLEKNLNDEILDRIIHHTSFEVMKDNP--LVNY-----THLPTTVMDHSKSPFMRKGTAGDWKNYFT 270

The following BLAST results are available for this feature:

BLAST of TCONS_00055227-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00055227-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ST1B1	1.206e-27	29.73	Sulfotransferase family cytosolic 1B member 1 OS=H...	[more]

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TCONS_00055227-protein (polypeptide) - C. hemisphaerica