TCONS_00055218-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055218-protein
Unique NameTCONS_00055218-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length212

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055218-protein ID=TCONS_00055218-protein|Name=TCONS_00055218-protein|organism=Clytia hemisphaerica|type=polypeptide|length=212bp
WTNWTEWSSSCSKPCNTGHVTRQRFCTNPQPLYGGQSCQGNSTEYKGCHF
HPCEEIDVDISVSFDEEFQEDDYVKQYMYKLRFDKFRVLLNNSGFDESIK
EIDVNRLRSGSVITDMTITFQHLDSFQLIFMMDSFDNGQVFEIRGGKISI
TFDKPSNFSTDKVPPAPTNISIQQQNGSWIISWSKVNNSLSSYGNVSGYI
FFYKESFEPSSS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034775XLOC_034775Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055218TCONS_00055218Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000884TSP1_rpt
IPR013783Ig-like_fold
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000884Thrombospondin type-1 (TSP1) repeatSMARTSM00209TSP1_2coord: 1..54
e-value: 3.0E-9
score: 46.7
IPR000884Thrombospondin type-1 (TSP1) repeatPFAMPF00090TSP_1coord: 3..53
e-value: 3.3E-9
score: 36.7
IPR000884Thrombospondin type-1 (TSP1) repeatGENE3D2.20.100.10coord: 1..44
e-value: 3.2E-12
score: 46.0
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 1..54
score: 11.204
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 1..50
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 45..212
e-value: 5.8E-5
score: 22.4

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00055218-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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