TCONS_00055208-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055208-protein
Unique NameTCONS_00055208-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length126

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055208-protein ID=TCONS_00055208-protein|Name=TCONS_00055208-protein|organism=Clytia hemisphaerica|type=polypeptide|length=126bp
VFIESRKRIKMTITSENPTTTLTGFNEIWYKIFLYCLGSNVFVHVIAAFI
ALRALHKHKYGRYLPVAIILIGFLYPISGGFITSCCIAWIYTAANYAMEV
QMCAIYGVGQTFFLVVVSFVRLYGTL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034769XLOC_034769Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055208TCONS_00055208Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019334Transmembrane_pr_170
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019334Transmembrane protein 170PFAMPF10190Tmemb_170coord: 22..126
e-value: 2.0E-34
score: 118.0

Blast
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BLAST of TCONS_00055208-protein vs. Swiss-Prot (Human)
Match: T170A (Transmembrane protein 170A OS=Homo sapiens GN=TMEM170A PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.842e-26
Identity = 49/108 (45.37%), Postives = 70/108 (64.81%), Query Frame = 0 
Query:   19 TTTLTGFNEIWYKIFLYCLGSNVFVHVIAAFIALRALHKHKYGRYLPVAIILIGFLYPISGGFITSCCIAWIYTAANYAMEVQMCAIYGVGQTFFLVVVSFVRLYGTL 126
            +T+L  F E+WY +FL+ L S++F HV A  +AL  L  HKYGR++ V+I+L+G + PI+ G +TS  IA +Y AA   M        G GQTF ++VVSF+R+  TL
Sbjct:   37 STSLCSFPEMWYGVFLWALVSSLFFHVPAGLLALFTLRHHKYGRFMSVSILLMGIVGPITAGILTSAAIAGVYRAAGKEMIPFEALTLGTGQTFCVLVVSFLRILATL 144
The following BLAST results are available for this feature:
BLAST of TCONS_00055208-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
T170A3.842e-2645.37Transmembrane protein 170A OS=Homo sapiens GN=TMEM... [more]
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