TCONS_00055202-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00055202-protein
Unique Name	TCONS_00055202-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	371

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00055202-protein ID=TCONS_00055202-protein|Name=TCONS_00055202-protein|organism=Clytia hemisphaerica|type=polypeptide|length=371bp
MKNHHILFSTLATLLLIVHFVKLEETEIAEEGHCDGDEPCFFDDIDDEED
ASVPVTLRKDGDEKQNGEYPVFDHLSRLDGVKVGDVLKKVVNGKTYELHT
RSLKPLLFEIPNAITEDEILHIRERAKFFTDGLIQSEARGGLTPMDNFKP
SKKKGKGLGPAADFVNWDLDENKIIDLNEVQLFCRNYNFLYFDEKEIIEM
FKRVEITEFDDGKITPEEFETLNTLGIEDYLNIVMREHPKHRQRTSDQVW
LPMSEEYDVVLSNLRNRFGEIFKIPQRVLLGSEHMQIVRYKPGGHYHAHH
DTETHKATNKPCCHHTSTATIKQHGRCRLCRILFGFAWNSFAEVVDLEIY
FRNMGCVVIRSHSYCSHYAIS

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_034768	XLOC_034768	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00055202	TCONS_00055202	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR018247	EF_Hand_1_Ca_BS
IPR011992	EF-hand-dom_pair

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.60.120.620		coord: 95..322 e-value: 3.2E-14 score: 52.7
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 168..180
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 164..225

Blast

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BLAST of TCONS_00055202-protein vs. Swiss-Prot (Human)
Match: P4HTM (Transmembrane prolyl 4-hydroxylase OS=Homo sapiens GN=P4HTM PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 3.573e-20
Identity = 88/337 (26.11%), Postives = 143/337 (42.43%), Query Frame = 0

Query:    5 HILFSTLATLLLIVHFVKLEETEIAEEGHCDGDEPCFFDDIDDEEDASVPVTLRKDGDEKQNGEYPVFDHLSRLDGVKVGDVLK-KVVNGKTYELHTRSLKPLLFEIPNAITEDEILHIRERAKFFTDGLIQSEARGGLTPMDNFKPSKKKGKGLGPAADFVNWDLDENKIIDLNEVQLFCRNYNFLYFDEKEIIEMFKRVEITEFDDGKITPEEFETLNTLGIEDYLNIVMREHPKHRQ---RTSDQVWLPMSEEYDVVLSNLRNRFGEIFKIPQRVLLGSEHMQIVRYKPGGHYHAHHDTETHKATNKPCCHHT---STATIKQHGRCRLCRILF 334
            H+    +  LLL VH+              +GDE     D   +  A  P            G  P    L+RL+G+KVG   K ++V  + + + T SLKPLLFEIP  +T++E   I   A+    GL +S+    + P + ++ +    + +     F   D + +  + L EV    R  N  +   + I EM+  ++     DG ++ +EF  ++      Y    MR H        R S   WL   E    ++  +R R   + ++   ++  SE +Q+VRY  GGHYHAH D  +     +  C HT   +  ++     CR   +LF
Sbjct:   69 HLYLGNVLALLLFVHY-------------SNGDESS---DPGPQHRAQGP------------GPEPTLGPLTRLEGIKVGHERKVQLVTDRDHFIRTLSLKPLLFEIPGFLTDEECRLIIHLAQM--KGLQRSQ----ILPTEEYEEAMSTMQ-VSQLDLFRLLDQNRDGHLQLREVLAQTRLGNGWWMTPESIQEMYAAIKADPDGDGVLSLQEFSNMDLRDFHKY----MRSHKAESSELVRNSHHTWLYQGEGAHHIMRAIRQRVLRLTRLSPEIVELSEPLQVVRYGEGGHYHAHVD--SGPVYPETICSHTKLVANESVPFETSCRYMTVLF 364

The following BLAST results are available for this feature:

BLAST of TCONS_00055202-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00055202-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
P4HTM	3.573e-20	26.11	Transmembrane prolyl 4-hydroxylase OS=Homo sapiens...	[more]

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TCONS_00055202-protein (polypeptide) - C. hemisphaerica