TCONS_00055104-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055104-protein
Unique NameTCONS_00055104-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1851

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055104-protein ID=TCONS_00055104-protein|Name=TCONS_00055104-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1851bp
MSNKKSQKEFTICVVGLSGYDNQEKRLYGVGKSCFCNRLVRPAQDEYYTD
HASVFSTSDFVGTVLNSDHFLYWGTAERNIENAETKGRIKIIEHTEFIDD
ASYSPLSKGGQLAAYTKRATSAKISSSGKMMYISRDQVALQNEFEEKQME
EKLQVDAFVCIYDVSTMLSKRTHYIQLQEEVLSNLLSNIAKTKKPAIIVA
SKCDKGDTQILQRAQNFVTNKKLNTQLVESSSELDVNVDYAFQVLWSLLD
TKNKHRVKPKPLSYQEGLLIQNEKVSGLNKKYLNLIQRCATENSLLMSWK
DFQALHGESSIFKEYILACGSDKAQLVFNQQAKKIKRHHEDKKLNEFLNK
LPDALDELLPTIQSIEANDWKWENCQKAIKNHLLFDKWFQVLPQGVPWNS
NDQLFKKTDRIPFDVLQVERSRACFDRHYKKLRESARKSRMKVEFRKLLE
LTLQIRPGTSWADASAWISNEESYKCLDEMERKVIFETYLREITYNAKTE
FQELLFESANKFSKLNKESRPSESEMRELYEYLQDDSRYKDLENLDNARD
ILLFNHIALMQSPNRCLSGPEKCMDRRIQHVVEMTERRTTQNPYENEINR
ENEDELLNLLIIGKNGLGRELEEKIRVGSSSCEDVEYIIDGQIYGLNLKV
HDVSQNSTTGASEVQSIITDFRPQGYLAIYSSPDSLRFIKECLKEIEEHE
NQTHTALPLIVLLANEAGTPESEIQFLRNEGHNLANSLQCIFLDYPYTVS
LMDDRIHSSQVEDSLRGVFDIINKRSRPAGTPGGTDDYNCDVRILLCSMC
GDEYSLELILSSMLQQNNCYSNPEKQDTIMLEAMVDGVKKTIAVTLGSYH
RAYGLKNQMFHGFILVYSAKRLASLETLKAYVATLPRNVPVQVLAVTGSS
SAASILFHKPDATYLLHDDTKLSTKLLQQQTSLNQANAFVNFFRDVCDKK
TFTERILQGVKKRRLQEPLPDIPTISQTTPTPEPRVNGDGGSLAVDDDTY
ASINDFKTPGVDSPYVEVAISRSYIEKGSDSSRSSPDRRGSFVDKRRSRT
STCDSSSDVLLDTSHDQQRHDEGYGGEANDVSGMYAQVDKKKTFSYLKKL
EQKVSSDDEDDEVIWKDNDAYLPVNDEYESIAKKMSDSPYATVPFLPKGH
RGRIVSDYEKYNTLPLTRAHSDSQEPGATPGYRNSMHVALGRDQDAVSLS
SKSKDSSGSLPELPTREKTSSMSSGGGETKSIWYIGDKKGGKKKKKNPAP
IARPEDDENDDISDLRQKLEDALITSPTSATAPPTTSSKNKKNQQQGVKS
PGKDGQRKSRSESNQSTSSLDPRNMSFMKKIMNKVSPNPSPVNSDVELDT
TIDTPTTPKKRSGLSIRKRRQSPSHHNNQQNSSQPVITVDDSLTKERSNT
LPTDSPRTTRSSKFGSLDNRGKSKSSIFKRTSELSPSENEWGSHTMDRRQ
SKKKKLTKSKHSKDDLDLPLGETTIDKKKRSNLGRSFRKAKSNLTKSKHG
DSDMNLKAKQWEAMKQNQNKAKNQNSYFGKNLADIIPQCGLCPIFVEKAI
KHVETNGMNTVGIYRQSGNKNDIKIIMDKFDADNNINLHELGISVHAVTG
ALKNFFNLLPEPLVPYEFGKKINTIMSIMDAEERLTKLGDMINQMPPVNH
EVFLKTMCHLHRVSLSSSSNMMDTRNLQIVLYPTLMRPEFKSLSNISQNM
NMALFVQTCIEQAERLFGVSNVQDMSVKITEAPSTSSLANILDESTTANI
TSNRLSSISITSTPQAPSGGEAGKNLPPSELNDSYELVHDEPSFSETVLA
ESGLESVVNSARSDGSSSKKKADSAKIDSVPVVVSSSTPTATEWKSFETA
I
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034713XLOC_034713Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055104TCONS_00055104Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000198RhoGAP_dom
IPR002713FF_domain
IPR008936Rho_GTPase_activation_prot
IPR027417P-loop_NTPase
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007165 signal transduction
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000198Rho GTPase-activating protein domainSMARTSM00324RhoGAP_3coord: 1540..1714
e-value: 1.9E-43
score: 160.3
IPR000198Rho GTPase-activating protein domainPFAMPF00620RhoGAPcoord: 1543..1691
e-value: 2.7E-38
score: 131.1
IPR000198Rho GTPase-activating protein domainPROSITEPS50238RHOGAPcoord: 1530..1717
score: 34.518
IPR002713FF domainSMARTSM00441FF_2coord: 438..492
e-value: 9.8E-5
score: 31.7
coord: 494..559
e-value: 2.3
score: 15.4
IPR002713FF domainPFAMPF01846FFcoord: 442..489
e-value: 4.4E-6
score: 26.7
IPR002713FF domainPROSITEPS51676FFcoord: 438..492
score: 9.262
IPR002713FF domainSUPERFAMILY81698FF domaincoord: 434..493
NoneNo IPR availableGENE3D1.10.555.10coord: 1419..1729
e-value: 2.3E-51
score: 174.0
NoneNo IPR availableGENE3D3.40.50.300coord: 2..344
e-value: 2.5E-14
score: 52.4
NoneNo IPR availableGENE3D1.10.10.440coord: 497..562
e-value: 3.0E-6
score: 27.1
NoneNo IPR availableGENE3D1.10.10.440coord: 425..495
e-value: 2.1E-7
score: 30.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 968..993
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1194..1502
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1026..1080
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1166..1185
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1808..1829
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1758..1784
NoneNo IPR availableCDDcd00882Ras_like_GTPasecoord: 28..243
e-value: 0.00262274
score: 38.2064
IPR008936Rho GTPase activation proteinSUPERFAMILY48350GTPase activation domain, GAPcoord: 1542..1719
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 28..41
coord: 129..250

Blast
BLAST of TCONS_00055104-protein vs. Swiss-Prot (Human)
Match: RHG05 (Rho GTPase-activating protein 5 OS=Homo sapiens GN=ARHGAP5 PE=1 SV=2)

HSP 1 Score: 541.191 bits (1393), Expect = 7.187e-164
Identity = 335/964 (34.75%), Postives = 532/964 (55.19%), Query Frame = 0
Query:   10 FTICVVGLSGYDNQEKRLYGVGKSCFCNRLVRPAQDEYYTDHASVFSTSDFVGTVLNSDHFLYWGTAERNIENAETKGRIKIIEHTEFIDDASYSPLSKGGQLAAYTKRATSAKISSSGKMMYISRDQVALQNEFEEKQMEE-KLQVDAFVCIYDVSTMLSKRTHYIQLQEEVLSNLLSNIAKTKKPAIIVASKCDKGDTQILQRAQNFVTNKKLNTQLVESSSELDVNVDYAFQVLWSLLDTKNKHRVKPKPLSYQEGLLIQNEKVSGLNKKYLNLIQRCATENSLLMSWKDFQALHGESSIFKEYILACGSDKAQLVFNQQAKKIKRHHEDKKLNEFLNKLPDALDELLPTIQSIEANDWKWENCQKAIKNHLLFDKWFQVLPQGVPWNSNDQLFKKTDR-IPFDVLQVERSRACFDRHYKKLRESARKSRMKVEFRKLLELTLQIRPGTSWADASAWISNEESYKCLDEMERKVIFETYLREITYNAKTEFQELLFESANKFSKLNKESRPSESEMRELYEYLQDDSRYKDLENLDNARDILLFNHIALMQSPNR--CLSGPEKCMDRRIQHVVEMTERRTTQNPYENEINRENEDELLNLLIIGKNGLGRELEEKIRVGSSSCEDVEYIIDGQIYGLNLKVHDVSQNSTTGASEVQSIITDFRPQGYLAIYSSPDSLRFIKECLKEIEEHENQTH-----TALPLIVLLANEAGTPESEIQFLRNEGHNLANSLQCIFLDYPYTVSLMDDRIHSSQVEDSLRGVFDII-NKRSRPAGTPGGTDDYNCDVRILLCSMCGDEYSLELILSSMLQQNNCYSNPEKQ-DTIMLEAMVDGVKKTIAVTLGSYHRAYGL-KNQMFHGFILVYSAKRLASLETLKAYVATLPRNVPVQVLAVTGSSSAASILFHKPDATYLLHDDTKLSTKLLQQQTSL-------NQANAFVNFFRDVCDKKTFTE 954
            +TI +VGLSG + ++K   GVGKSC CNR VR   DEYY +H SV ST DF G V+N+DHFLYWG   +N E+   + +I +IE TEFIDD ++ P  +   L  Y KRA ++K+ S+ K+MYI  DQ+ L+ +FE+KQM E KL VD F+   DVS   +++      Q + ++NL   ++K+KKP II A+KCD+     L+  Q F +NKK N  +VE+S+  +VN++  F  L  +LD   K R KPK + Y +    Q + V     K+  L+Q   T      +WK           ++EYI   G+ KA+  F++  +++K+ H  K+  E++N LP A + LLP ++ IE     W    K ++    F   F VL +  PW+  D + K  DR IPFD+L    +   +  H + L    R+  MK +F+K LE    I PG  W +   ++  +E+YK + E + K ++  + REI   AK EFQE+LFE +  F  L+  + PS  +M E++  L ++ RYK L+ L   R+ LL  HI  +  P +  CLSG + C D +++ ++  +  +          +  N D+ +NL I+GK+GL +EL  +IR  S+   D EY +DG+IY L+L+   V   S    S++ +    F+P G   +++S +SL FI E + +I    +Q         LP  ++LAN+  +    +  LR++G  LAN LQC F+D P        + + +Q++ +LRGV + + +     +  P   D    D+RI++C+MCGD +S++LILS  L  ++C +    Q +++ML+ ++   ++ I +T+ SYH + G+ K+++ HG+ILVYSAKR AS+  L+A+++ +   +PVQ++AVT S +     F       L+ +   ++T++  + T+L        Q   F  FF DV +KK   E
Sbjct:   13 YTISIVGLSGTE-KDKGNCGVGKSCLCNRFVRSKADEYYPEHTSVLSTIDFGGRVVNNDHFLYWGDIIQNSEDG-VECKIHVIEQTEFIDDQTFLP-HRSTNLQPYIKRAAASKLQSAEKLMYICTDQLGLEQDFEQKQMPEGKLNVDGFLLCIDVSQGCNRK---FDDQLKFVNNLFVQLSKSKKPVIIAATKCDECVDHYLREVQAFASNKK-NLLVVETSARFNVNIETCFTALVQMLD---KTRSKPKIIPYLDAYKTQRQLVVTATDKFEKLVQ---TVRDYHATWKTVSNKLKNHPDYEEYINLEGTRKARNTFSKHIEQLKQEHIRKRREEYINTLPRAFNTLLPNLEEIEH--LNWSEALKLMEKRADFQLCFVVL-EKTPWDETDHIDKINDRRIPFDLLSTLEAEKVYQNHVQHLISEKRRVEMKEKFKKTLEKIQFISPGQPWEEVMCFVMEDEAYKYITEADSKEVYGRHQREIVEKAKEEFQEMLFEHSELFYDLDLNATPSSDKMSEIHTVLSEEPRYKALQKLAPDRESLLLKHIGFVYHPTKETCLSG-QNCTDIKVEQLLASSLLQLDHGRLRLYHDSTNIDK-VNLFILGKDGLAQELANEIRTQST---DDEYALDGKIYELDLR--PVDAKSPYFLSQLWT--AAFKPHGCFCVFNSIESLSFIGEFIGKIRTEASQIRKDKYMANLPFTLILANQRDSISKNLPILRHQGQQLANKLQCPFVDVP--AGTYPRKFNETQIKQALRGVLESVKHNLDVVSPIPANKDLSEADLRIVMCAMCGDPFSVDLILSPFLDSHSCSAAQAGQNNSLMLDKIIGEKRRRIQITILSYHSSIGVRKDELVHGYILVYSAKRKASMGMLRAFLSEVQDTIPVQLVAVTDSQAD---FFENEAIKELMTEGEHIATEITAKFTALYSLSQYHRQTEVFTLFFSDVLEKKNMIE 946          

HSP 2 Score: 155.221 bits (391), Expect = 1.377e-37
Identity = 78/194 (40.21%), Postives = 116/194 (59.79%), Query Frame = 0
Query: 1524 QNSYFGKNLADIIPQCGLCPIFVEKAIKHVETNGMNTVGIYRQSGNKNDIKIIMDKFDADNNINLHELGISVHAVTGALKNFFNLLPEPLVPYEFGKKINTIMSIMDAEERLTKLGDMINQMPPVNHEVFLKTMCHLHRVSLSSSSNMMDTRNLQIVLYPTLMRPEFKSLSNISQNMNMALFVQTCIEQAERLF 1717
            +++YFG  L D++      P+FVEK ++ +E  G+ T G+YR SGNK D   I  +FD D+NINL  + ++V+AV GALK FF  LP+PL+PY    ++     I D  ERL  L +++ +  PVN++VF   + HL+RVS     N+M   NL I  +PTLMRP+F++   +S        V+T I+Q +  F
Sbjct: 1256 ESNYFGMPLQDLVTAEKPIPLFVEKCVEFIEDTGLCTEGLYRVSGNKTDQDNIQKQFDQDHNINLVSMEVTVNAVAGALKAFFADLPDPLIPYSLHPELLEAAKIPDKTERLHALKEIVKKFHPVNYDVFRYVITHLNRVSQQHKINLMTADNLSICFWPTLMRPDFENREFLSTTKIHQSVVETFIQQCQFFF 1449          
The following BLAST results are available for this feature:
BLAST of TCONS_00055104-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RHG057.187e-16434.75Rho GTPase-activating protein 5 OS=Homo sapiens GN... [more]
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