TCONS_00055077-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055077-protein
Unique NameTCONS_00055077-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length222

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055077-protein ID=TCONS_00055077-protein|Name=TCONS_00055077-protein|organism=Clytia hemisphaerica|type=polypeptide|length=222bp
MDIAFLTREVFNQCCLNIQRAGESIGDFWFWNEFKHDKEQRFLHKVSTIP
WQITPNKAEERSHGLEDELFEDNETHDLECEVVVPLAIQKEQKNTFIKME
HHVVYSDNYSVPVLYFNGSYQDGRPITLQEVWNSIPEHYQHAMRDKWSFI
TQQEHPYLQRPFFQVHPCHTETMLKTLLPEKSKCENTLLMWLSAIAPIVH
LELSMHYFTNKPAPQEPCDTNG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034701XLOC_034701Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055077TCONS_00055077Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007135Autophagy-rel_prot_3
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007135Autophagy-related protein 3PFAMPF03987Autophagy_act_Ccoord: 103..169
e-value: 9.1E-18
score: 64.5

Blast
[Close]
BLAST of TCONS_00055077-protein vs. Swiss-Prot (Human)
Match: ATG10 (Ubiquitin-like-conjugating enzyme ATG10 OS=Homo sapiens GN=ATG10 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 2.064e-31
Identity = 73/212 (34.43%), Postives = 106/212 (50.00%), Query Frame = 0 
Query:    5 FLTREVFNQCCLNIQRAGESIGDFWFWNEFKHDKEQRFLHKVSTIPWQITPNKA----EERSHGLEDELFEDNETHDLE-CEVVVPLAIQKEQKNTFIKMEHHVVYSDNYSVPVLYFNGSYQDGRPITLQEVWNSIPEHYQ-HAMRDKWSFITQQEHPYLQRPFFQVHPCHTETMLKTLLPEKSKCE---NTLLMWLSAIAPIVHLELSMHY 207
            F+  + F + C    +  + IGD W W   K D    ++ K   I +QI            +HG      E+     L+ CEV     I+    +  IK E+HV+YS +Y VPVLYF  S+ DGRP+TL+++W  + E Y+   ++  W  ITQQEHP L +PFF +HPC T   +  +L    K     N +  WLS + P+V L L + Y
Sbjct:    6 FIGEKTFQRYCAEFIKHSQQIGDSWEWRPSK-DCSDGYMCK---IHFQIKNGSVMSHLGASTHGQTCLPMEEAFELPLDDCEV-----IETAAASEVIKYEYHVLYSCSYQVPVLYFRASFLDGRPLTLKDIWEGVHECYKMRLLQGPWDTITQQEHPILGQPFFVLHPCKTNEFMTPVLKNSQKINKNVNYITSWLSIVGPVVGLNLPLSY 208
The following BLAST results are available for this feature:
BLAST of TCONS_00055077-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ATG102.064e-3134.43Ubiquitin-like-conjugating enzyme ATG10 OS=Homo sa... [more]
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