TCONS_00055055-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055055-protein
Unique NameTCONS_00055055-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length341

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055055-protein ID=TCONS_00055055-protein|Name=TCONS_00055055-protein|organism=Clytia hemisphaerica|type=polypeptide|length=341bp
MSHDENKPIKVLEFYSGIGGMHYALKRSGIKYDVIGAFDINTNANEVYKY
NFPDVRLMQKNLEGLTVVDLDKWAAQCWTMSPPCQPYTRQGKQEASKDAR
AKSFLHILDLFSQMKTPPTYILIENVKGFDVSDTRKHLLETLRSRGYSIQ
EFLISPVELGVPNSRLRYYLLAKLNGDKNKSLNENLEFENIESKSISHYL
NKNDESFDERSSLISDNVLQRFWKIMDIVHEDSIGSCCFTKAYGKYIEGT
GSIFTKISKSQAEEIFKKIKSLPEGQNEEQFQLLRSLKLRYFTPIEISRL
LCFPDDFSFPDKMTVRQRYQLLGNSVNVYTIGYLMKEYLFI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034682XLOC_034682Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055055TCONS_00055055Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001525C5_MeTfrase
IPR029063SAM-dependent_MTases
Vocabulary: Molecular Function
TermDefinition
GO:0008168methyltransferase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008168 methyltransferase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001525C-5 cytosine methyltransferasePRINTSPR00105C5METTRFRASEcoord: 160..173
score: 38.5
coord: 117..131
score: 40.67
coord: 10..26
score: 33.06
IPR001525C-5 cytosine methyltransferaseTIGRFAMTIGR00675TIGR00675coord: 12..332
e-value: 3.2E-36
score: 123.5
IPR001525C-5 cytosine methyltransferasePROSITEPS51679SAM_MT_C5coord: 9..341
score: 43.242
NoneNo IPR availableGENE3D3.40.50.150coord: 7..189
e-value: 2.7E-45
score: 153.5
NoneNo IPR availableGENE3D3.90.120.10coord: 190..326
e-value: 5.3E-32
score: 110.6
IPR029063S-adenosyl-L-methionine-dependent methyltransferasePFAMPF00145DNA_methylasecoord: 9..337
e-value: 1.1E-42
score: 146.5
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 7..336

Blast
[Close]
BLAST of TCONS_00055055-protein vs. Swiss-Prot (Human)
Match: TRDMT (tRNA (cytosine(38)-C(5))-methyltransferase OS=Homo sapiens GN=TRDMT1 PE=1 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 2.873e-101
Identity = 162/389 (41.65%), Postives = 223/389 (57.33%), Query Frame = 0 
Query:    7 KPIKVLEFYSGIGGMHYALKRSGIKYDVIGAFDINTNANEVYKYNFPDVRLMQKNLEGLTVVDLDKWAAQCWTMSPPCQPYTRQGKQEASKDARAKSFLHILDLFSQMKTPPTYILIENVKGFDVSDTRKHLLETLRSRGYSIQEFLISPVELGVPNSRLRYYLLAKL---------------------------------NGDKNKSLNENLEFEN-------------IESKSISHYLNKNDESF-------------DERSSLISDNVLQRFWKIMDIVHEDSIGSCCFTKAYGKYIEGTGSIFTKISKSQAEEIFKKIKSLPEGQNEEQFQLLRSLKLRYFTPIEISRLLCFPDDFSFPDKMTVRQRYQLLGNSVNVYTIGYLMK 336
            +P++VLE YSG+GGMH+AL+ S I   V+ A D+NT ANEVYKYNFP  +L+ K +EG+T+ + D+ +     MSPPCQP+TR G+Q    D+R  SFLHILD+  +++  P YIL+ENVKGF+VS TR  L++T+ + G+  QEFL+SP  LG+PNSRLRY+L+AKL                                 N  + K++  N+ F+              +E+    H  N+ D                D    L+    L R+  ++DIV      S CFTK YG YIEGTGS+       Q E I+K + +L +   EEQ   L  LKLRYFTP EI+ LL FP +F FP+K+TV+QRY+LLGNS+NV+ +  L+K
Sbjct:    2 EPLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQPFTRIGRQGDMTDSRTNSFLHILDILPRLQKLPKYILLENVKGFEVSSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPGQVLMEFPKIESVHPQKYAMDVENKIQEKNVEPNISFDGSIQCSGKDAILFKLETAEEIHRKNQQDSDLSVKMLKDFLEDDTDVNQYLLPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSYIEGTGSVLQTAEDVQVENIYKSLTNLSQ---EEQITKLLILKLRYFTPKEIANLLGFPPEFGFPEKITVKQRYRLLGNSLNVHVVAKLIK 387
The following BLAST results are available for this feature:
BLAST of TCONS_00055055-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TRDMT2.873e-10141.65tRNA (cytosine(38)-C(5))-methyltransferase OS=Homo... [more]
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