TCONS_00055008-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00055008-protein
Unique Name	TCONS_00055008-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	508

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00055008-protein ID=TCONS_00055008-protein|Name=TCONS_00055008-protein|organism=Clytia hemisphaerica|type=polypeptide|length=508bp
MIDASESNLRKDCQFINGESLDVPGYDTHDGRRVRNNLNDVLPVSTGIKG
HDKMSAALLASCIASIASILFGYTMGYTSPTQKDIEKELMSTTQFSWFAS
LVAIGAIIGSTLGAIMIEKYGRKTTIMLISLVHVPGWCLICYGHSVEILY
FGRFLTGIGVGVGSLAVPMYIAEVASARLRGGLGSINQFAITIGILMVYL
VGYCLSWRWAAIIPVMLSALMVLLMSLMPESPRWLLANNKRHLALLELSK
LRGQFYDSEEECFEIESNLDQQGKISLSDFKEPALYRPFIICSMLMLFQQ
FTGINAIILYCTKIFDLAGLHYPTVISLAVAATQILFTGIACLVVDKSGR
RILLLAGSVVMFLCQFLLGVYFDLIEVDGDDNKISIFGKFSHTFSPHKIS
ILAISCIVIYIAIFSIGWGPLPWLLMSELLPPKAKGLVGGFVTLINWTCV
FITTNLFHKMVSTFFAQGTFWFFAGFALLSFLFTLFYVPETKGKTLEEIE
EIFAQRSG

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_034656	XLOC_034656	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00055008	TCONS_00055008	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003663	Sugar/inositol_transpt
IPR005828	MFS_sugar_transport-like
IPR005829	Sugar_transporter_CS
IPR020846	MFS_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0022891	substrate-specific transmembrane transporter activity
GO:0022857	transmembrane transporter activity
GO:0005215	transporter activity

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0022891	substrate-specific transmembrane transporter activity
molecular_function	GO:0022857	transmembrane transporter activity
molecular_function	GO:0005215	transporter activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003663	Sugar/inositol transporter	PRINTS	PR00171	SUGRTRNSPORT	coord: 68..78 score: 37.5 coord: 404..425 score: 35.34 coord: 299..309 score: 55.0 coord: 150..169 score: 41.88
IPR003663	Sugar/inositol transporter	TIGRFAM	TIGR00879	TIGR00879	coord: 56..499 e-value: 7.2E-92 score: 306.5
IPR005828	Major facilitator, sugar transporter-like	PFAM	PF00083	Sugar_tr	coord: 62..503 e-value: 2.4E-97 score: 326.5
None	No IPR available	GENE3D	1.20.1250.20		coord: 53..245 e-value: 1.1E-28 score: 99.4
None	No IPR available	GENE3D	1.20.1250.20		coord: 264..508 e-value: 5.9E-36 score: 123.2
IPR005829	Sugar transporter, conserved site	PROSITE	PS00217	SUGAR_TRANSPORT_2	coord: 155..180
IPR005829	Sugar transporter, conserved site	PROSITE	PS00216	SUGAR_TRANSPORT_1	coord: 113..130
IPR020846	Major facilitator superfamily domain	PROSITE	PS50850	MFS	coord: 60..492 score: 41.323
IPR020846	Major facilitator superfamily domain	CDD	cd06174	MFS	coord: 63..488 e-value: 1.51308E-25 score: 105.088
IPR020846	Major facilitator superfamily domain	SUPERFAMILY	103473	MFS general substrate transporter	coord: 63..243 coord: 401..501 coord: 271..375

Blast

[Close]

BLAST of TCONS_00055008-protein vs. Swiss-Prot (Human)
Match: GTR8 (Solute carrier family 2, facilitated glucose transporter member 8 OS=Homo sapiens GN=SLC2A8 PE=1 SV=3)

HSP 1 Score: 286.189 bits (731), Expect = 4.339e-91
Identity = 169/446 (37.89%), Postives = 256/446 (57.40%), Query Frame = 0

Query:   71 FGYTMGYTSPTQKDIEKELMSTTQF-----SWFASLVAIGAIIGSTLGAIMIEKYGRKTTIMLISLVHVPGWCLICYGHSVEILYFGRFLTGIGVGVGSLAVPMYIAEVASARLRGGLGSINQFAITIGILMVYLVGYCLSWRWAAIIPVMLSALMVLLMSLMPESPRWLLANNKRHLALLELSKLRGQFYDSEEECFEIESNLDQQGKISLSDFKEPALYRPFIICSMLMLFQQFTGINAIILYCTKIFDLAGLHYPTVISLAVAATQILFTGIACLVVDKSGRRILLLAGSVVMFLCQFLLGVYFDLIE-VDGDDNKISIFGKFSHTFSPHKISI----LAISCIVIYIAIFSIGWGPLPWLLMSELLPPKAKGLVGGFVTLINWTCVFITTNLFHKMVSTFFAQGTFWFFAGFALLSFLFTLFYVPETKGKTLEEIEEIFAQR 506
            FG+ +GY+SP    +++      +      SWF ++V +GA  G  LG  ++++ GRK +++L S+  V G+ +I     V +L  GR LTG+  GV SL  P+YI+E+A   +RG LGS  Q  + +GIL+ YL G+ L WRW A++  +  +LM+LLM  MPE+PR+LL  ++R  A+  L  L G      E+ +E +  +  +    L+  ++P +Y+PFII   LM FQQ +G+NA++ Y   IF+ A     ++ S+ V   Q+LFT +A L++D++GRR+LL+   VVM       G YF L +   G+ + ++I    S    P   S+    LA+  + ++IA F++GWGP+PWLLMSE+ P   KG+  G   L NW   F+ T  F  ++      G FW  + F + S LFTLF VPETKGKTLE+I   F  R
Sbjct:   40 FGFALGYSSPAIPSLQRAAPPAPRLDDAAASWFGAVVTLGAAAGGVLGGWLVDRAGRKLSLLLCSVPFVAGFAVITAAQDVWMLLGGRLLTGLACGVASLVAPVYISEIAYPAVRGLLGSCVQLMVVVGILLAYLAGWVLEWRWLAVLGCVPPSLMLLLMCFMPETPRFLLTQHRRQEAMAALRFLWG-----SEQGWE-DPPIGAEQSFHLALLRQPGIYKPFIIGVSLMAFQQLSGVNAVMFYAETIFEEAKFKDSSLASVVVGVIQVLFTAVAALIMDRAGRRLLLVLSGVVMVFSTSAFGAYFKLTQGGPGNSSHVAISAPVSA--QPVDASVGLAWLAVGSMCLFIAGFAVGWGPIPWLLMSEIFPLHVKGVATGICVLTNWLMAFLVTKEFSSLMEVLRPYGAFWLASAFCIFSVLFTLFCVPETKGKTLEQITAHFEGR 477

The following BLAST results are available for this feature:

BLAST of TCONS_00055008-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00055008-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
GTR8	4.339e-91	37.89	Solute carrier family 2, facilitated glucose trans...	[more]

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TCONS_00055008-protein (polypeptide) - C. hemisphaerica