TCONS_00054915-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00054915-protein
Unique NameTCONS_00054915-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length646

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00054915-protein ID=TCONS_00054915-protein|Name=TCONS_00054915-protein|organism=Clytia hemisphaerica|type=polypeptide|length=646bp
MYKIIRQQQTIQRALREAKYSRRNYSRLAQQTNQLRATPTNHGALRAGIR
RMATSGSSGGGNDAMLIAAGMGILGATGMMGYYMTNTEYEGPRDVKEPEP
VAEVEEEVAEAPEEAATEEAATEEAATEEAATSTDQEQTPTEVVETPETP
SEEIVEEPSAPLRKYPEEATYVIIGAGTAAHAACRAIRKKDKTAKILIIG
EENALPYMRPPLSKELWFSEDEKVTETLKFKSWNGKERSVFFEGEDYYTK
VEDFNEGDRALSVITGEKVVQVNPECHEVTLASGESIKYGKLLIATGGTP
RGLSVFDTQGVKDKLTLFRNIADFQSLTSAVSEAEHVAVVGGGFLGSELA
CALASHGKKKGLKVTQIYPEEGNMAKVLPKYLSDWTTNKVKNEGVNILSK
SSVKETSSEGKQVKLTLDSGEEALADHVVVCVGLQPNVELAKSAGLEVDS
QQGGFRVNSELEARSDIWVAGDAACFYDINLGRRRVEHHDHAVVSGRLAG
ENMTGAKKSYQHQSMFWSDLGPEVGYEAIGVCDSSLPTVGFWAKATASDT
PKGSEEATGESVRSDAESENVAQSEGSAVAVETPAAQTEGSEESFGKGIV
FYTREKKVVGILLWNIFSQMPIARKIVTEGKDHDDFNALVKAFKLH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034603XLOC_034603Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00054915TCONS_00054915Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023753FAD/NAD-binding_dom
IPR016156FAD/NAD-linked_Rdtase_dimer
IPR029324AIF_C
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0050660flavin adenine dinucleotide binding
GO:0046983protein dimerization activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0050660 flavin adenine dinucleotide binding
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0046983 protein dimerization activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00368FADPNRcoord: 425..441
score: 33.13
coord: 289..307
score: 28.97
coord: 336..354
score: 42.98
coord: 171..190
score: 27.64
NoneNo IPR availablePRINTSPR00411PNDRDTASEIcoord: 336..361
score: 31.45
coord: 426..440
score: 31.83
coord: 170..192
score: 25.92
coord: 467..474
score: 40.56
NoneNo IPR availableSMARTSM01353AIF_C_2coord: 499..630
e-value: 3.5E-75
score: 265.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 547..590
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 91..158
IPR023753FAD/NAD(P)-binding domainPFAMPF07992Pyr_redox_2coord: 171..494
e-value: 9.9E-52
score: 175.9
IPR023753FAD/NAD(P)-binding domainGENE3D3.50.50.60coord: 331..514
e-value: 4.6E-26
score: 91.3
IPR023753FAD/NAD(P)-binding domainGENE3D3.50.50.60coord: 124..296
e-value: 5.2E-11
score: 42.3
IPR023753FAD/NAD(P)-binding domainSUPERFAMILY51905FAD/NAD(P)-binding domaincoord: 332..508
IPR023753FAD/NAD(P)-binding domainSUPERFAMILY51905FAD/NAD(P)-binding domaincoord: 166..381
IPR016156FAD/NAD-linked reductase, dimerisation domainGENE3D3.30.390.30coord: 515..646
e-value: 8.3E-45
score: 151.6
IPR016156FAD/NAD-linked reductase, dimerisation domainSUPERFAMILY55424FAD/NAD-linked reductases, dimerisation (C-terminal) domaincoord: 512..643
IPR029324Mitochondrial apoptosis-inducing factor, C-terminal domainPFAMPF14721AIF_Ccoord: 499..628
e-value: 7.4E-53
score: 178.3

Blast
[Close]
BLAST of TCONS_00054915-protein vs. Swiss-Prot (Human)
Match: AIFM1 (Apoptosis-inducing factor 1, mitochondrial OS=Homo sapiens GN=AIFM1 PE=1 SV=1)

HSP 1 Score: 553.518 bits (1425), Expect = 0.000e+0
Identity = 292/603 (48.42%), Postives = 391/603 (64.84%), Query Frame = 0 
Query:   50 RRMATSGSSGG--GNDAMLIAAGMGILGATGMMGYYMTNTEYEGPRDVKEPEPVAEVEEEVAEAPEEAATEEAATEEAATEEAATSTDQEQTPTEVVETPETPSEEIVEEPSAPLRKYPEEATYVIIGAGTAAHAACRAIRKKDKTAKILIIGEENALPYMRPPLSKELWFSEDEKVTETLKFKSWNGKERSVFFEGEDYYTKVEDFNEGDRA-LSVITGEKVVQVNPECHEVTLASGESIKYGKLLIATGGTPRGLSVFDTQG--VKDKLTLFRNIADFQSLTSAVSEAEHVAVVGGGFLGSELACALASHGKKKGLKVTQIYPEEGNMAKVLPKYLSDWTTNKVKNEGVNILSKSSVKETSSEGKQVKLTLDSGEEALADHVVVCVGLQPNVELAKSAGLEVDSQQGGFRVNSELEARSDIWVAGDAACFYDINLGRRRVEHHDHAVVSGRLAGENMTGAKKSYQHQSMFWSDLGPEVGYEAIGVCDSSLPTVGFWAKATASDTPKGSEEATGESVRSDAESENVAQSEGSAVAVETPAA-QTEGSEESFGKGIVFYTREKKVVGILLWNIFSQMPIARKIVTEGKDHDDFNALVKAFKLH 646
            R+MA+SG+SGG   N  +++  G+  +GA    G Y   T                ++E+     E  +      E+   + A ++++ E+ P +                     K P    +++IG GTAA AA R+IR +D  A++LI+ E+  LPYMRPPLSKELWFS+D  VT+TL+FK WNGKERS++F+   +Y   +D    +   ++V+TG+KVVQ++   + V L  G  I Y K LIATGGTPR LS  D  G  VK + TLFR I DF+SL     E + + ++GGGFLGSELACAL    +  G +V Q++PE+GNM K+LP+YLS+WT  KV+ EGV ++  + V+       ++ + L  G +   DH+V  VGL+PNVELAK+ GLE+DS  GGFRVN+EL+ARS+IWVAGDAACFYDI LGRRRVEHHDHAVVSGRLAGENMTGA K Y HQSMFWSDLGP+VGYEAIG+ DSSLPTVG +AKATA D PK + E +G  +RS++E+E+ A      +   TPA  Q     E +GKG++FY R+K VVGI+LWNIF++MPIARKI+ +G+ H+D N + K F +H
Sbjct:   52 RQMASSGASGGKIDNSVLVLIVGLSTVGA----GAYAYKT----------------MKEDEKRYNERISGLGLTPEQKQKKAALSASEGEEVPQD---------------------KAPSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQPPSFYVSAQDLPHIENGGVAVLTGKKVVQLDVRDNMVKLNDGSQITYEKCLIATGGTPRSLSAIDRAGAEVKSRTTLFRKIGDFRSLEKISREVKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGKILPEYLSNWTMEKVRREGVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLEPNVELAKTGGLEIDSDFGGFRVNAELQARSNIWVAGDAACFYDIKLGRRRVEHHDHAVVSGRLAGENMTGAAKPYWHQSMFWSDLGPDVGYEAIGLVDSSLPTVGVFAKATAQDNPKSATEQSGTGIRSESETESEASE--ITIPPSTPAVPQAPVQGEDYGKGVIFYLRDKVVVGIVLWNIFNRMPIARKIIKDGEQHEDLNEVAKLFNIH 611
The following BLAST results are available for this feature:
BLAST of TCONS_00054915-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AIFM10.000e+048.42Apoptosis-inducing factor 1, mitochondrial OS=Homo... [more]
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