TCONS_00054657-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00054657-protein
Unique NameTCONS_00054657-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1168

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00054657-protein ID=TCONS_00054657-protein|Name=TCONS_00054657-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1168bp
MKYQGLIFLLLFTRLKTIESAEPVINNAINEIKVSYCSTQEYKLDANAYS
DAEDGNLVGGKLTLKLLDASAATFVPNDEKPVQLVGTSLFIVPVSTTQSE
LNLILRVMDTSGSFKDDRFKVTFNNKISVREISFHFTLSKVTTGDVQIQD
LFNFYQALKELTTWKTRNFGLSEITNVADKKKEVAVFDCGMTQSTCPLQT
ILNLINDVKDQNPGPTYTLNFDSKMAAIDLQASGFRWEKFDRCIGVSGVP
DRDINLEFWSFAGIQAIDRTQVIQVEIPDGGFTYESIKQSTMTLEIQSGR
NDPTIAFDNFWIGAELEGSKWIIYAVRTDRFYEYISLTGNFFEHKGILYA
QVFVSASVLLPISVERNDYYMSVENTTKPMNNYIVEFSVGITGIAKHIYP
KQINIFLSKLYVTFGTSYKELIYVNDYVIESFDGRNGDGVIRWSLMMDKC
DFDRIEFIRSKMFESGSQEEINNDFKLRMKREYDLRSIKETLSGDCNLSK
PKQSSPIGPYQISYCGINSFKLADDTFIDEEDGNLAKLTAKMTTEQNKPI
GSDDIIQFDDATKIIYGLLPSTYNPPLQREITYKLVVTDSSNLSTETVVK
FIVSDDSKTIPYSISITTKFTAESTSFNHSPGLALAFKVGNYFGDNDNGF
SMVSSQTSSDGNQVIKFGNCTWSTPQCDFVNLNFYKNKLLATSTSLNALL
DLKPEFEVLNVEEVIKPPCDKDNPPEVSNPLQDLSVTTCATFIFNIPANT
FNDVEQGNTRNLDVSIHFSGLQFGQTEMLHFQETTQIIAIVASESDLNSY
NFELKTTDIGGNQAIDSFIVQVQKEEKEPSHIFTFQFRILKNDFQNYVEL
YSFVRRRFKEFFGDRETDNTFQIFKTEKVSSGYGKDSVHIIEWSNCTITR
DECKNEKIERLKSHVFDGDAIKDEFRQSFQTDFFILASSFKLFGVCDVDP
PFVENPIPDQNLGFCGPLIYQIPESTFKDSNDGNTRALQLKMTLENGEQI
PDTFFIQFNEEEQTIYGILVDKNNENLPSVVSLKITAENAGMKFAETSFK
IFITKNKKAFSVTFKMRYARPKQLDTVDNLVKTSKLLTEYLEWNIDDFYG
YKYSTFGKLTSFTFSTCKAXNTAPLGSSLLLHFQHAKQSSLPVIGKSLKQ
LKVKLLKMANQANHLNHQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034428XLOC_034428Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00054657TCONS_00054657Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
IPR008465DAG1
IPR030398SEA_DG_dom
IPR015919Cadherin-like
Vocabulary: Cellular Component
TermDefinition
GO:0016010dystrophin-associated glycoprotein complex
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0007016cytoskeletal anchoring at plasma membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007016 cytoskeletal anchoring at plasma membrane
cellular_component GO:0016010 dystrophin-associated glycoprotein complex
cellular_component GO:0016020 membrane
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1148..1168
NoneNo IPR availableCOILSCoilCoilcoord: 528..548
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 949..1057
e-value: 0.3
score: 11.3
coord: 723..827
e-value: 1.9E-4
score: 21.6
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 500..625
e-value: 0.64
score: 10.1
IPR008465DystroglycanPFAMPF05454DAG1coord: 833..947
e-value: 1.9E-5
score: 24.1
IPR030398DG-type SEA domainPROSITEPS51699SEA_DGcoord: 828..945
score: 16.864
IPR015919Cadherin-likeSUPERFAMILY49313Cadherin-likecoord: 725..824
IPR015919Cadherin-likeSUPERFAMILY49313Cadherin-likecoord: 950..1055

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00054657-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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