TCONS_00054359-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00054359-protein
Unique NameTCONS_00054359-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length541

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00054359-protein ID=TCONS_00054359-protein|Name=TCONS_00054359-protein|organism=Clytia hemisphaerica|type=polypeptide|length=541bp
MTQATQYKDQGNKALSAGNFPEAIKLYTQAIELDSANHVFYSNRSAAYAK
NKEYQKALEDAQKTVDIKSDWGKGYSRLGAAYEYLGKEMDAMDAYTEGLK
HEPNNATLKESAKNLEAKIARANNPFMDPNLEAKLAMDPRCREFMSDPSF
VAQLSMLKQDPSKLTMLAQTDQRFLTVLSVLLNIPMDMQQPGGKPDSKPA
PSKPKEPEPKKEEPKVTLSDNQKSAVSEKEKGNAAYKKKDFETAHQHYDK
AIELDPTNIVYYTNKTAVFFEEKKYTECLELCQKAIEIGRENRADFALIA
KPMVRIGNVHHAQGEIRKAIEMWKDSLSESNNQQVRDKIYKAEKVLKEQE
HLAYINPEKAEEERNMGNEAFKKADYPTAVKHYNEAIKRNPSDPRVYSNR
AACYTKLAEFGLALADVDECLKLDDKFLKAYLRKGGICLMIKQILRAKTA
YEKALEIDPSCQEAREGIMKCQQQKHSLTPEERQKQAMEDPEVQEILRDP
AMRMILEQMQQNPTAANEHFQNPGVREKLLKLADAGIIQMR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034275XLOC_034275Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00054359TCONS_00054359Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR006636STI1_HS-bd
IPR011990TPR-like_helical_dom
IPR001440TPR_1
IPR013026TPR-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 44..64
NoneNo IPR availableGENE3D1.20.58.280coord: 455..516
e-value: 0.06
score: 12.8
NoneNo IPR availablePFAMPF13432TPR_16coord: 9..63
e-value: 5.6E-5
score: 23.6
NoneNo IPR availableGENE3D1.20.58.280coord: 1..28
e-value: 6.1E-7
score: 29.0
NoneNo IPR availableGENE3D1.20.58.280coord: 407..434
e-value: 2.2E-5
score: 23.8
NoneNo IPR availableGENE3D1.10.150.160coord: 216..269
e-value: 1.6E-13
score: 50.0
coord: 352..406
e-value: 1.1E-14
score: 53.7
NoneNo IPR availablePFAMPF13414TPR_11coord: 367..406
e-value: 4.4E-7
score: 29.4
NoneNo IPR availableGENE3D1.10.150.200coord: 270..310
e-value: 6.1E-6
score: 25.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 186..234
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 300..333
e-value: 6.1
score: 15.8
coord: 394..427
e-value: 0.0034
score: 26.6
coord: 428..461
e-value: 0.05
score: 22.7
coord: 259..292
e-value: 0.076
score: 22.1
coord: 38..71
e-value: 1.8
score: 17.6
coord: 4..37
e-value: 0.0011
score: 28.2
coord: 360..393
e-value: 0.0017
score: 27.6
coord: 225..258
e-value: 5.2E-4
score: 29.3
coord: 72..105
e-value: 5.1E-4
score: 29.4
IPR019734Tetratricopeptide repeatPFAMPF13181TPR_8coord: 429..461
e-value: 0.0039
score: 17.2
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 72..105
score: 9.794
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 428..461
score: 8.201
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 4..37
score: 9.853
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 360..393
score: 10.148
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 259..292
score: 5.959
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 38..71
score: 6.874
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 225..258
score: 10.591
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 394..427
score: 6.844
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 300..333
score: 7.552
IPR006636Heat shock chaperonin-bindingSMARTSM00727CBMcoord: 490..529
e-value: 6.8E-10
score: 48.9
coord: 128..167
e-value: 2.8
score: 13.2
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 311..351
e-value: 0.034
score: 13.6
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 29..119
e-value: 1.6E-18
score: 66.1
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 435..454
e-value: 0.0055
score: 16.1
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 223..348
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 358..472
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 3..116
IPR001440Tetratricopeptide repeat 1PFAMPF00515TPR_1coord: 229..258
e-value: 3.5E-7
score: 29.7
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 4..105
score: 22.768
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 225..461
score: 28.461

Blast
[Close]
BLAST of TCONS_00054359-protein vs. Swiss-Prot (Human)
Match: STIP1 (Stress-induced-phosphoprotein 1 OS=Homo sapiens GN=STIP1 PE=1 SV=1)

HSP 1 Score: 528.865 bits (1361), Expect = 0.000e+0
Identity = 285/549 (51.91%), Postives = 374/549 (68.12%), Query Frame = 0 
Query:    1 MTQATQYKDQGNKALSAGNFPEAIKLYTQAIELDSANHVFYSNRSAAYAKNKEYQKALEDAQKTVDIKSDWGKGYSRLGAAYEYLGKEMDAMDAYTEGLKHEPNNATLKESAKNLEAKIA--RANNPFMDPNLEAKLAMDPRCREFMSDPSFVAQLSMLKQDPSKLTMLAQTDQRFLTVLSVLLNI---PMDMQQPGGKPDSKPAPSKPKEPEPKKEEPKVTLSDNQKSAVSEKEKGNAAYKKKDFETAHQHYDKAIELDPTNIVYYTNKTAVFFEEKKYTECLELCQKAIEIGRENRADFALIAKPMVRIGNVHHAQGEIRKAIEMWKDSLSESNNQQVRDKIYKAEKVLKEQEHLAYINPEKAEEERNMGNEAFKKADYPTAVKHYNEAIKRNPSDPRVYSNRAACYTKLAEFGLALADVDECLKLDDKFLKAYLRKGGICLMIKQILRAKTAYEKALEIDPSCQEAREGIMKC---QQQKHSLTPEERQKQAMEDPEVQEILRDPAMRMILEQMQQNPTAANEHFQNPGVREKLLKLADAGIIQMR 541
            M Q  + K++GNKALS GN  +A++ Y++AI+LD  NHV YSNRSAAYAK  +YQKA ED  KTVD+K DWGKGYSR  AA E+L +  +A   Y EGLKHE NN  LKE  +N+EA++A  +  NPF  PNL  KL  DPR R  +SDP++   +  L+  PS L    Q D R +T LSVLL +    MD ++    P   P P K  +PEP +E+    L +N+K A+ EKE GN AYKKKDF+TA +HYDKA ELDPTN+ Y TN+ AV+FE+  Y +C ELC+KAIE+GRENR D+  IAK   RIGN +  + + + AI  +  SL+E     V  K  +AEK+LKEQE LAYINP+ A EE+N GNE F+K DYP A+KHY EAIKRNP D ++YSNRAACYTKL EF LAL D +EC++L+  F+K Y RK      +K   +A   Y+KAL++D SC+EA +G  +C   Q  +H  +PE+ +++AM DPEVQ+I+ DPAMR+ILEQMQ++P A +EH +NP + +K+ KL D G+I +R
Sbjct:    1 MEQVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNMEARLAERKFMNPFNMPNLYQKLESDPRTRTLLSDPTYRELIEQLRNKPSDLGTKLQ-DPRIMTTLSVLLGVDLGSMDEEEEIATPPPPPPPKKETKPEPMEED----LPENKKQALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHRTPDVLKKCQQAEKILKEQERLAYINPDLALEEKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQRCMMAQYNRHD-SPEDVKRRAMADPEVQQIMSDPAMRLILEQMQKDPQALSEHLKNPVIAQKIQKLMDVGLIAIR 543
The following BLAST results are available for this feature:
BLAST of TCONS_00054359-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
STIP10.000e+051.91Stress-induced-phosphoprotein 1 OS=Homo sapiens GN... [more]
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