TCONS_00054200-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00054200-protein
Unique NameTCONS_00054200-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length612

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00054200-protein ID=TCONS_00054200-protein|Name=TCONS_00054200-protein|organism=Clytia hemisphaerica|type=polypeptide|length=612bp
MRIHTSRVLIFLLFVIWIGGMLYFFTSSSNAPPPLSPEEQARLIALGKLA
RDRDHKGHKEHHDIGHGQDHQKPDEKKYNVKGNIFIAKDPKMRSNNRDSR
SLKDFDWHGYVQRGALKPGEDKNVRNAYNQEASEKLAWDRPIPDVRDAKC
RNKRYDTDLPTTTIIICFHNEGRAALLRTVVSALNRSPDHLLKEIILVDD
FSDNPADGKELGSIPKVKVLRNDKREGLIRSRVKGADIAKGDVLTFLDSH
CEENEMWLEPLLQAIKDNRKAVVAPIIDVIAHETFEYLSSSSELRGGFGW
NLNFKWDFLPPKYLEEHRRDRTAPIKSPAIAGGLFSIDKKWFETLGKYDN
QMDVWGGENLEISFRAWQCGGEMHILPCSRVGHVFRERHPYKFPGGSMNV
FQKNTRRAAEVWMDDYKRFYFGAVPSARYAIFGDIHERMELRNKLGCKSF
KWFLNNVYPELKVPDSDVIKYGSLKNNGENCMDTMGHQINEGVGIFSCHG
QGGNQDWSWTKHDQIKHEEICVTAIGSDEHSAVLMRKCDKNXIGSDEHSA
VLMRKCDKNDRFQKWRYEEGTRAIVNTGSNLCLDNYKMGQDVVTNKCLGQ
DTQLWTIDMANS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034188XLOC_034188Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00054200TCONS_00054200Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000772Ricin_B_lectin
IPR029044Nucleotide-diphossugar_trans
IPR001173Glyco_trans_2-like
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000772Ricin B, lectin domainSMARTSM00458ricin_3coord: 465..608
e-value: 1.6E-20
score: 84.1
IPR000772Ricin B, lectin domainPFAMPF00652Ricin_B_lectincoord: 471..541
e-value: 4.3E-11
score: 43.1
coord: 545..605
e-value: 1.1E-8
score: 35.3
IPR000772Ricin B, lectin domainPROSITEPS50231RICIN_B_LECTINcoord: 465..608
score: 24.621
IPR000772Ricin B, lectin domainSUPERFAMILY50370Ricin B-like lectinscoord: 464..607
IPR029044Nucleotide-diphospho-sugar transferasesGENE3D3.90.550.10coord: 113..429
e-value: 1.6E-57
score: 194.7
IPR029044Nucleotide-diphospho-sugar transferasesSUPERFAMILY53448Nucleotide-diphospho-sugar transferasescoord: 139..460
IPR001173Glycosyltransferase 2-likePFAMPF00535Glycos_transf_2coord: 163..341
e-value: 1.9E-29
score: 102.6
NoneNo IPR availableGENE3D2.80.10.50coord: 555..612
e-value: 3.1E-10
score: 39.6
NoneNo IPR availableGENE3D2.80.10.50coord: 430..554
e-value: 1.2E-18
score: 67.1
NoneNo IPR availableCDDcd00161RICINcoord: 474..607
e-value: 1.99499E-21
score: 89.487
NoneNo IPR availableCDDcd02510pp-GalNAc-Tcoord: 163..458
e-value: 2.40648E-175
score: 501.734

Blast
[Close]
BLAST of TCONS_00054200-protein vs. Swiss-Prot (Human)
Match: GALT2 (Polypeptide N-acetylgalactosaminyltransferase 2 OS=Homo sapiens GN=GALNT2 PE=1 SV=1)

HSP 1 Score: 565.844 bits (1457), Expect = 0.000e+0
Identity = 266/482 (55.19%), Postives = 345/482 (71.58%), Query Frame = 0 
Query:  104 DFDWHGYVQRGALKPGEDKNVRNAYNQEASEKLAWDRPIPDVRDAKCRNKRYDTDLPTTTIIICFHNEGRAALLRTVVSALNRSPDHLLKEIILVDDFSDNPADGKELGSIPKVKVLRNDKREGLIRSRVKGADIAKGDVLTFLDSHCEENEMWLEPLLQAIKDNRKAVVAPIIDVIAHETFEYLSSSSELRGGFGWNLNFKWDFLPPKYLEEHRRDRTAPIKSPAIAGGLFSIDKKWFETLGKYDNQMDVWGGENLEISFRAWQCGGEMHILPCSRVGHVFRERHPYKFPGGSMNVFQKNTRRAAEVWMDDYKRFYFGAVPSARYAIFGDIHERMELRNKLGCKSFKWFLNNVYPELKVPDSDVIKYGSLKNNGENCMDTMGHQINEGVGIFSCHGQGGNQDWSWTKHDQIKHEEICVTAIGSDEHSAVLMRKCDKNXIGSDEHSAVLMRKCDKNDRFQKWRYEEGTRAIVNTGSNLCLDN 585
            DF+   YV    ++ G+D   RN +NQ  S+KL  DR IPD R  +C+ K++  DLP T+++I FHNE R+ALLRTVVS L +SP HL+KEIILVDD+S++P DG  LG I KV+VLRND+REGL+RSRV+GAD A+  VLTFLDSHCE NE WLEPLL+ + ++R  VV+PIIDVI  + F+Y+ +S++L+GGF WNL FKWD++ P+     + +  APIK+P IAGGLF +DK +FE LGKYD  MDVWGGENLEISFR WQCGG + I+PCSRVGHVFR++HPY FPGGS  VF +NTRRAAEVWMD+YK FY+ AVPSAR   +G+I  R+ELR KL CK FKW+L NVYPEL+VPD   I +G+L+  G NC+DT+GH  +  VG++ CH  GGNQ+W+ TK   +KH ++C+T +  D     L++                ++ C +ND  QKW   EG   + + GSNLCLD+
Sbjct:   80 DFNQEAYVGGTMVRSGQDPYARNKFNQVESDKLRMDRAIPDTRHDQCQRKQWRVDLPATSVVITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGALLGKIEKVRVLRNDRREGLMRSRVRGADAAQAKVLTFLDSHCECNEHWLEPLLERVAEDRTRVVSPIIDVINMDNFQYVGASADLKGGFDWNLVFKWDYMTPEQRRSRQGNPVAPIKTPMIAGGLFVMDKFYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVFRKQHPYTFPGGSGTVFARNTRRAAEVWMDEYKNFYYAAVPSARNVPYGNIQSRLELRKKLSCKPFKWYLENVYPELRVPDHQDIAFGALQ-QGTNCLDTLGHFADGVVGVYECHNAGGNQEWALTKEKSVKHMDLCLTVV--DRAPGSLIK----------------LQGCRENDSRQKWEQIEGNSKLRHVGSNLCLDS 542
The following BLAST results are available for this feature:
BLAST of TCONS_00054200-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GALT20.000e+055.19Polypeptide N-acetylgalactosaminyltransferase 2 OS... [more]
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