TCONS_00054007-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00054007-protein
Unique NameTCONS_00054007-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length199

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00054007-protein ID=TCONS_00054007-protein|Name=TCONS_00054007-protein|organism=Clytia hemisphaerica|type=polypeptide|length=199bp
MARSKTTKMSNMVLSLCEPKKVSAEPLTWGRTKEKIALEAFMKFEGIKHK
LSSGLHVYKSNPYLGATPDGIFTCKCKECVEVKCPYSLREKSIIEGETYR
ELGYLELNNNELRLKKNHSYDAQVNGQMAITGTQYSFFVVWTPKGPPLIL
KVAFDQEYWYDMLPNLSLFFKSYICPYLLCIKKIFHCPVCSDICLSEEE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034092XLOC_034092Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00054007TCONS_00054007Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019080YqaJ_viral_recombinase
IPR011604Exonuc_phg/RecB_C
IPR011335Restrct_endonuc-II-like
Vocabulary: Molecular Function
TermDefinition
GO:0004518nuclease activity
GO:0003677DNA binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding
molecular_function GO:0004518 nuclease activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019080YqaJ viral recombinasePFAMPF09588YqaJcoord: 12..134
e-value: 2.5E-12
score: 47.1
IPR011604Exonuclease, phage-type/RecB, C-terminalGENE3D3.90.320.10coord: 1..175
e-value: 5.7E-28
score: 97.3
IPR011335Restriction endonuclease type II-likeSUPERFAMILY52980Restriction endonuclease-likecoord: 20..175

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00054007-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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