TCONS_00053970-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00053970-protein
Unique NameTCONS_00053970-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length580

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00053970-protein ID=TCONS_00053970-protein|Name=TCONS_00053970-protein|organism=Clytia hemisphaerica|type=polypeptide|length=580bp
MGQVLLESLTTKQICLFGATLFLFSTAFFVIGGTKGADPASANVHIANLF
HQKDVTAFGDDNRWEFYRVAKGPMRNPTAFEGSIFELMQKNPLSASTNLI
FSSKIPHPGAKMHPAYQFMLVIMNIRVDYMQQGMGRAMNIDCDMEFNAKL
AYSDVEDPTEEKHWTFLQRVHNQSRPLICTFSGMQSREDGEEKTPEGKQK
YQQWNHYTCQDQHFFELGSVPHKHYLVNVHLPGDGQNKECLAGGRHFLSG
MDFVEIHQNGGYTISLFVSKTVMFPFIIGALLFFVRRIKRESRQWLLLER
CILWLGSATSILLLPIDWFTLVTDMPYMLFFSDLRQGFFYACLLVFWCLF
AGEHILDQEERNQLSSYKYEIGSIVIGCVSLFLFDTVERGVQMKNPFHTI
WKRDSGEKAAKAFIALAAIASIIYCLFFMRLLYFVRKNINMKSAALPAMQ
TERRLFYENKIYRFRVLLYATLSTVVITIICFIMDQVNETTWKFQDNSMN
DYIIVSSAMHFGVFGMWGTYVFAVLILYSPDGKSNTSGNAVYYKRSEHLL
SAGSTSDAQHEHDDEGEGDEIISLPHPKKI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034063XLOC_034063Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00053970TCONS_00053970Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF06664MIG-14_Wnt-bdcoord: 209..530
e-value: 1.8E-58
score: 198.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 554..580

Blast
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BLAST of TCONS_00053970-protein vs. Swiss-Prot (Human)
Match: WLS (Protein wntless homolog OS=Homo sapiens GN=WLS PE=1 SV=2)

HSP 1 Score: 326.635 bits (836), Expect = 6.272e-105
Identity = 193/537 (35.94%), Postives = 299/537 (55.68%), Query Frame = 0 
Query:    1 MGQVLLESLTTKQICLFGATLFLFSTAFFVIGGTKGADPASANVHIANLFHQKDVTAFGDDNRWEFYRVAKGPMRNPTAFEGSIFELMQKNPLSASTN-LIFSSKIPHPGAKMHPAYQFMLVIMNIRVDYMQQGMGRAMNIDCDMEFNAKLAYSD--VEDPTEEKHWTFLQRVHNQSRPLICTFSGMQSREDGEEKTPEGKQKYQQWNHYTCQDQHFFELGSVPHKHYLVNVHLPGDGQNKECLAGGRHFLSGMDFVEIHQNGGYTISLFVSKTVMFPFIIGALLFFVRRIKRESRQWLLLERCILWLGSATSILLLPIDWFTLVTDMPYMLFFSDLRQGFFYACLLVFWCLFAGEHILDQEERNQLSSYKYEIGSIVIGCVSLFLFDTVERGVQMKNPFHTIWKRDSGEKAAKAFIALAAIASIIYCLFFMRLLYFVRKNINMKSAALPAMQTERRLFYENKIYRFRVLLYATLSTVVITIICFIMDQVNETTWKFQDNSMNDYIIVSSAMHFGVFGMWGTYVFAVLILYSPDGKS 534
            M   ++E+++TK++C+ G  L +F    F++GG     P +A  +++     K V A  + ++ +++ V  GP          I ++ +  P     N ++FS  IP P  +M P +QFML I+ + + +      R    + ++  +  LAY D    + TE  H    +RV    R L CTF+          KTPE + +Y     Y C    F E+GSV HK YL+N+ LP + + K  +  G   +  +  V IHQNGG+T   F  KT + P I   ++++ RRI   SR  +LLE+ I  LG + + + +P++WF++  D  +ML F D+RQG FYA LL FW +F GEH++DQ ERN ++ Y  ++G I +G   LF+FD  ERGVQ+ NPF++IW  D G + A AFI +A I   +Y LF   +++ V +NI+ K ++LPAM   RRL YE  I+RF+ L+  TL+   +T+I FI+ QV E  WK+   ++     V+SA   G++GMW  YVFA++ LY+P  K+
Sbjct:    1 MAGAIIENMSTKKLCIVGGILLVFQIIAFLVGGLIAPGPTTAVSYMS----VKCVDARKNHHKTKWF-VPWGPNHC-----DKIRDIEEAIPREIEANDIVFSVHIPLPHMEMSPWFQFMLFILQLDIAFKLNNQIRE---NAEVSMDVSLAYRDDAFAEWTEMAH----ERV---PRKLKCTFT--------SPKTPEHEGRY-----YECDVLPFMEIGSVAHKFYLLNIRLPVNEKKKINVGIGE--IKDIRLVGIHQNGGFTKVWFAMKTFLTPSIFIIMVWYWRRITMMSRPPVLLEKVIFALGISMTFINIPVEWFSIGFDWTWMLLFGDIRQGIFYAMLLSFWIIFCGEHMMDQHERNHIAGYWKQVGPIAVGSFCLFIFDMCERGVQLTNPFYSIWTTDIGTELAMAFIIVAGICLCLYFLFLCFMVFQVFRNISGKQSSLPAMSKVRRLHYEGLIFRFKFLMLITLACAAMTVIFFIVSQVTEGHWKWGGVTVQ----VNSAFFTGIYGMWNLYVFALMFLYAPSHKN 498
The following BLAST results are available for this feature:
BLAST of TCONS_00053970-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
WLS6.272e-10535.94Protein wntless homolog OS=Homo sapiens GN=WLS PE=... [more]
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