TCONS_00053925-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00053925-protein
Unique NameTCONS_00053925-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length376

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00053925-protein ID=TCONS_00053925-protein|Name=TCONS_00053925-protein|organism=Clytia hemisphaerica|type=polypeptide|length=376bp
MLNICIAKQHWHRVLPSIARLSTSKAIEDGLYSGPEIKTAIPGPISLEKK
SEMIGLNASADAIFFFVDYAKSKGNYMVDVDENVILDAHGQISSLPLGYN
HPALRKAVESDDVKNYLINRPVLGILPPSDTKDLLEKTLLKVKPKGMDYV
QTMMCGSCSNENAFKSAFIKYMNDERGYEMPSEEDLLSCMSAQAPGTPDL
VILSFTTGFHGRTIGCLAASKTKPMYRVDIPIHDWPTADFPHLKYPLNEH
EKENREIEDRALETVRKTIMESNARGRKVAAAIIEPIQGDGGDNHATPYF
FKELQKILKEFNAAFIVDEVQSGGGGSGKIWAHEHWGLEEPPDMVTFAKK
MQVGGFYYKKDYLVKQVGNDHFLEIK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034045XLOC_034045Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00053925TCONS_00053925Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005814Aminotrans_3
IPR015421PyrdxlP-dep_Trfase_major_sub1
IPR015422PyrdxlP-dep_Trfase_sub2
IPR015424PyrdxlP-dep_Trfase
Vocabulary: Molecular Function
TermDefinition
GO:0008483transaminase activity
GO:0030170pyridoxal phosphate binding
GO:0003824catalytic activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003824 catalytic activity
molecular_function GO:0030170 pyridoxal phosphate binding
molecular_function GO:0008483 transaminase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 247..267
IPR005814Aminotransferase class-IIIPIRSFPIRSF000521Transaminase_4ab_Lys_Orncoord: 7..372
e-value: 8.5E-130
score: 431.3
IPR005814Aminotransferase class-IIIPFAMPF00202Aminotran_3coord: 65..359
e-value: 7.6E-71
score: 238.8
IPR015421Pyridoxal phosphate-dependent transferase, major region, subdomain 1GENE3D3.40.640.10coord: 102..360
e-value: 4.1E-53
score: 180.0
IPR015422Pyridoxal phosphate-dependent transferase, subdomain 2GENE3D3.90.1150.10coord: 65..101
e-value: 3.0E-5
score: 23.1
IPR015424Pyridoxal phosphate-dependent transferaseSUPERFAMILY53383PLP-dependent transferasescoord: 64..356

Blast
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BLAST of TCONS_00053925-protein vs. Swiss-Prot (Human)
Match: GABT (4-aminobutyrate aminotransferase, mitochondrial OS=Homo sapiens GN=ABAT PE=1 SV=3)

HSP 1 Score: 369.392 bits (947), Expect = 3.868e-125
Identity = 177/357 (49.58%), Postives = 247/357 (69.19%), Query Frame = 0 
Query:    9 QHWHRVL-PSIARLSTSKAIEDGL--YSGPEIKTAIPGPISLEKKSEMIGLNASADAIFFFVDYAKSKGNYMVDVDENVILDAHGQISSLPLGYNHPALRKAVESDDVKNYLINRPVLGILPPSDTKDLLEKTLLKVKPKGMDYVQTMMCGSCSNENAFKSAFIKYMNDERGYEMPSEEDLLSCMSAQAPGTPDLVILSFTTGFHGRTIGCLAASKTKPMYRVDIPIHDWPTADFPHLKYPLNEHEKENREIEDRALETVRKTIMESNARGRKVAAAIIEPIQGDGGDNHATPYFFKELQKILKEFNAAFIVDEVQSGGGGSGKIWAHEHWGLEEPPDMVTFAKKMQVGGFYYKKDY 362
            QH +R+L P    +S + A  D    Y GP +KT +PGP S E   ++  +  +A+A+ FF +Y +S+GNY+VDVD N +LD + QISS+P+GY+HPAL K ++     +  +NRP LGILPP +  + L ++LL V PKGM  + TM CGSCSNENA K+ F+ Y + ERG    S+E+L +CM  QAPG PD  ILSF   FHGRT+GCLA + +K ++++DIP  DWP A FP LKYPL E  KEN++ E R LE V   I++   + + VA  I+EPIQ +GGDNHA+  FF++L+ I ++   AF+VDEVQ+GGG +GK WAHEHWGL++P D++TF+KKM  GGF++K+++
Sbjct:   15 QHSYRLLVPGSRHISQAAAKVDVEFDYDGPLMKTEVPGPRSQELMKQL-NIIQNAEAVHFFCNYEESRGNYLVDVDGNRMLDLYSQISSVPIGYSHPALLKLIQQPQNASMFVNRPALGILPPENFVEKLRQSLLSVAPKGMSQLITMACGSCSNENALKTIFMWYRSKERGQRGFSQEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDIARKHGCAFLVDEVQTGGGCTGKFWAHEHWGLDDPADVMTFSKKMMTGGFFHKEEF 370
The following BLAST results are available for this feature:
BLAST of TCONS_00053925-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GABT3.868e-12549.584-aminobutyrate aminotransferase, mitochondrial OS... [more]
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