TCONS_00053872-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00053872-protein
Unique NameTCONS_00053872-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length313

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00053872-protein ID=TCONS_00053872-protein|Name=TCONS_00053872-protein|organism=Clytia hemisphaerica|type=polypeptide|length=313bp
KGSPFDAENYRPISLLSNIDKIFQKLMHKRLINFLDQTNSIYSLQFGFRS
GHSTETALLYCVNQISSVLDEGDFGCSIFIDLQKAFDTVDHSILLAKLDF
YGIRGKSLDWFRSFLTDRSQFVSVSSKNSTSRRMQHGVPQGSVLGPLLFL
LYVNDLHTALRYSLVNLFADDTMLFLRDESLKPIAKRANTDLKLLMNWLK
ANKISLNVGKTELMIFRPIRKKINYDLKIKVNGRKLIPSKVVKYLVVYLD
EHLNWKHHINFVCNKLKRANGALSKLRHYVDKKTLTSLYYSIFQCHLSYA
XXXXXXXXXXXXX
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034001XLOC_034001Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00053872TCONS_00053872Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 7..245
e-value: 8.6E-44
score: 149.6
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..227
score: 21.81
NoneNo IPR availableGENE3D3.30.70.270coord: 52..231
e-value: 8.0E-25
score: 87.0
NoneNo IPR availableCDDcd01650RT_nLTR_likecoord: 1..245
e-value: 5.90904E-44
score: 150.519
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 6..218

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00053872-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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