TCONS_00053838-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00053838-protein
Unique Name	TCONS_00053838-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	349

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00053838-protein ID=TCONS_00053838-protein|Name=TCONS_00053838-protein|organism=Clytia hemisphaerica|type=polypeptide|length=349bp
MRLYRFRCTRLERYFQHSRWRPVSNYLGHEDIDFVGYHLKRTSITLAIHS
CFPFLYYVGLGISSPNLKLLYIHNLSGFGLLFALICIGSFTAGLLIAVSW
KISNWQYHPLTRDLLRYGSPWRAVASTINLEYRRMEKFSSITGGTSIYVT
DSWIIKCSTYKIYIAQQTDSHLSVVQSEEYLYNQETNQSAQFLKIKVMTI
PPNEQSFFLNLNSLEYTDLKDRISSPLRLARDVIVHQTLSDRFLEAFKLQ
VSTNGAPEVMPNNVAERESCIGCMGIRADIVLSKHCLPRALPQAEQCQQC
YCRPMWCLECMGKWFASRQNQQEPESWMSSTAPCPTCRAKFCMIDVFKI

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_033973	XLOC_033973	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00053838	TCONS_00053838	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR018801	Tmpp129
IPR013083	Znf_RING/FYVE/PHD

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018801	Putative transmembrane protein precursor	PFAM	PF10272	Tmpp129	coord: 24..347 e-value: 1.6E-111 score: 373.0
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10		coord: 177..348 e-value: 6.8E-4 score: 18.5

Blast

[Close]

BLAST of TCONS_00053838-protein vs. Swiss-Prot (Human)
Match: TM129 (E3 ubiquitin-protein ligase TM129 OS=Homo sapiens GN=TMEM129 PE=1 SV=1)

HSP 1 Score: 288.886 bits (738), Expect = 8.734e-96
Identity = 139/330 (42.12%), Postives = 205/330 (62.12%), Query Frame = 0

Query:   23 VSNYLGHEDIDFVGYHLKRTSITLAIHSCFPFLYYVGLGISSPNLKLLYIHNLSGFGLLFALICIGSFTAGLLIAVSWKISNWQYHPLTRDLLRYGSP---WRAVASTINLEYRRMEKFSSITGGTSIYVTDSWIIKCSTYKIYIAQQTDSHLSVVQSEEYLYNQETNQSAQFLKIKVMTIPPNEQSFFLNLNSLEYTDLKDRISSPLRLARDVIVHQTLSDRFLEAFKLQVSTNGAPEVMPNNVAERESCIGCMGIRADIVLSKHCLPRALPQAEQCQQCYCRPMWCLECMGKWFASRQNQQEPESWMSSTAPCPTCRAKFCMIDVFKI 349
            +S +LG ED  FV +HL+RT+ TL  HS  P  YYVG+ +++   +L  +        LF L+ +   +   ++   W    W  HPL R L  Y  P   W+AVAS++N E+RR++KF++   G  + VTD+W++K +TY++++AQQ D HL+V +S ++  + ++N   Q L I+V +  P  Q+F + LNS EY +L +++ +P+R A  V++HQ+L D FLE F   V  N A  V  +   E E+CIGCM  RA + L K C   A     +CQQCYCRPMWCL CMGKWFASRQ+   P++W++S  PCPTCRA+FC++DV  +
Sbjct:   37 LSGWLGSEDAAFVPFHLRRTAATLLCHSLLPLGYYVGMCLAASEKRLHALSQAPEAWRLFLLLAVTLPSIACILIYYWSRDRWACHPLARTLALYALPQSGWQAVASSVNTEFRRIDKFATGAPGARVIVTDTWVMKVTTYRVHVAQQQDVHLTVTESRQHELSPDSNLPVQLLTIRVASTNPAVQAFDIWLNSTEYGELCEKLRAPIRRAAHVVIHQSLGDLFLETFASLVEVNPAYSVPSSQ--ELEACIGCMQTRASVKLVKTCQEAA---TGECQQCYCRPMWCLTCMGKWFASRQDPLRPDTWLASRVPCPTCRARFCILDVCTV 361

The following BLAST results are available for this feature:

BLAST of TCONS_00053838-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00053838-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
TM129	8.734e-96	42.12	E3 ubiquitin-protein ligase TM129 OS=Homo sapiens ...	[more]

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TCONS_00053838-protein (polypeptide) - C. hemisphaerica