TCONS_00053584-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00053584-protein
Unique NameTCONS_00053584-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1259

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00053584-protein ID=TCONS_00053584-protein|Name=TCONS_00053584-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1259bp
MNEEQRFILISNRKAISQDLLVGDVFSYFQSKFVLDIDEVELIKGELTSR
EKAEKLVETLLSKKRNFFRHFYKSLKFAEYYHLCELLESGMDDVESSDED
GSSSSDDEDSDVGDLPKVETILRNGGVPQIPQIFVDRQQCIQQIQDALNA
LEDDIGWVVFHGMAGSGKTLLASDGLNNEPLVHRCFPGGIFWVNVGKVDN
ARLLMKMQNLCHWLDNDGLYRTPKNVEEARDRLRILFSLEHPKSLLVLDD
VWSDNVLKYFDVRCRTLLITRNPAIANTLSGNIINVQIKETLTFSQSQQV
LALWTNMEIKDLPEESNSIINQCKGSPLAISMIGALLKGHKNRWSYYVKQ
LDEQKISKVKSKLSYDYTSLYDAFAVSFNDLSDELQEHFEKLSIFNESIG
IPVETLSILWDCDEVETEDMMDELIGRSLVTSNTSNEDDEKKTCYFVHDI
QLGFIKEKMTEKKKIKGFHQLLIERYLERHGDFKDIPDDGYIHWYLISHL
IMADDVTTAVQLMKDLFWLQRCLDFTSPVSLITQFNSLLDAMSSSSTNYQ
ESVELLSDIRRLIGAHSHLFASEDDKMNFTQLALIQPSSNQVFKIALESG
KTKLKEKSDSVFYQWLNRPKEIQDDLTLSIKVHVDQVNCCRLDHSKENPT
VVSCGSDHLVKVWDSVNGKILSTLEGHSDSVNCCCFSSDDKRIITASSDC
TIRTWSLMNETELKCLRGHRSDVLCCQCSNDDQFLCSASVDSTVKIWDME
TGFLVCSFDEHEDVVNWCCFSHDSKMVASCSNDQSLKIWDIESRECQTQW
CDEDFIAFCIFTPDDEQVLYTIGDQIKIFNLSDEMVEKTIETPSDVLSLA
FSPDQQYLASAHTDMSARLYDLENEVFVRVYTGHSSWLTSVCFCQSNRTL
VTSSADGICNVWSLNTENYSTEKLIPVFDASFLDPEHPLIAACSNKNQVK
MFRMIGLAGESPAFKMSISSCKISRNEKMLAVGLANGNIEVMEIKTVEDS
PKISFHQSSTFEKHKKAIVKLEFTRSDELLMSCDEEIITIWDVASKELYR
TYEYHTETITKCLTFDNGKYLASTSYDGNFKIMNVETNLEVFGYENEENA
MMSCTATLDNKMVAACSSNNQCKIWSFDEGQLLHTLEENDVIRTIQFSGD
NKFIATGCDNGSVKIWNTKTGRLKTEMKDHTGWITDIKFDRKSHLVQTVS
DNLKFFNTKGDRLQTIPLIGHYLTAVLPSDDFTLCITVDNQGYLYVLQMN
KQTSVLFVL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033815XLOC_033815Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00053584TCONS_00053584Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom
IPR001315CARD
IPR011991WHTH_DNA-bd_dom
IPR002182NB-ARC
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR027417P-loop_NTPase
IPR011029DEATH-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0043531ADP binding
Vocabulary: Biological Process
TermDefinition
GO:0042981regulation of apoptotic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042981 regulation of apoptotic process
molecular_function GO:0043531 ADP binding
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 693..707
score: 32.98
coord: 777..791
score: 35.48
coord: 735..749
score: 40.74
NoneNo IPR availablePRINTSPR00364DISEASERSISTcoord: 157..172
score: 45.78
coord: 238..252
score: 47.5
coord: 323..337
score: 40.83
NoneNo IPR availableGENE3D2.80.10.50coord: 626..675
e-value: 1.7E-8
score: 34.2
coord: 676..709
e-value: 9.7E-14
score: 51.1
NoneNo IPR availableGENE3D3.40.50.300coord: 116..290
e-value: 5.0E-17
score: 61.3
NoneNo IPR availableGENE3D1.10.533.10coord: 1..107
e-value: 2.2E-16
score: 59.5
NoneNo IPR availableGENE3D1.10.10.670coord: 1124..1153
e-value: 6.3E-12
score: 44.8
coord: 746..805
e-value: 1.2E-18
score: 66.3
NoneNo IPR availableGENE3D2.40.50.140coord: 710..745
e-value: 1.2E-15
score: 56.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 93..113
NoneNo IPR availableCDDcd01671CARDcoord: 9..87
e-value: 8.9512E-16
score: 73.7048
NoneNo IPR availableCDDcd00200WD40coord: 626..913
e-value: 1.47243E-68
score: 232.225
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 623..664
e-value: 0.0013
score: 28.0
coord: 1170..1207
e-value: 1.0
score: 16.9
coord: 954..993
e-value: 110.0
score: 4.1
coord: 709..748
e-value: 8.5E-10
score: 48.6
coord: 792..830
e-value: 82.0
score: 4.9
coord: 1004..1042
e-value: 2.0
score: 15.1
coord: 667..706
e-value: 7.2E-11
score: 52.1
coord: 874..913
e-value: 1.4E-7
score: 41.2
coord: 833..871
e-value: 1.7E-4
score: 30.9
coord: 1087..1126
e-value: 6.0
score: 12.1
coord: 1129..1167
e-value: 8.8E-7
score: 38.5
coord: 1045..1084
e-value: 0.034
score: 23.3
coord: 917..953
e-value: 280.0
score: 1.5
coord: 751..790
e-value: 1.0E-8
score: 44.9
IPR001680WD40 repeatPFAMPF00400WD40coord: 878..913
e-value: 2.3E-5
score: 25.0
coord: 1130..1167
e-value: 8.1E-6
score: 26.4
coord: 712..748
e-value: 3.8E-7
score: 30.6
coord: 629..664
e-value: 0.008
score: 16.9
coord: 755..790
e-value: 5.9E-5
score: 23.7
coord: 844..871
e-value: 0.0088
score: 16.8
coord: 668..705
e-value: 1.9E-6
score: 28.4
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 630..673
score: 9.038
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 846..880
score: 9.305
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 674..715
score: 13.683
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 1135..1176
score: 11.344
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 758..799
score: 12.915
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 716..757
score: 13.382
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 881..922
score: 12.313
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 806..918
e-value: 9.1E-25
score: 87.0
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 1154..1258
e-value: 6.5E-14
score: 51.0
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 919..1123
e-value: 4.2E-25
score: 88.0
IPR001315CARD domainPFAMPF00619CARDcoord: 11..89
e-value: 1.8E-11
score: 43.8
IPR001315CARD domainPROSITEPS50209CARDcoord: 1..90
score: 12.763
IPR011991Winged helix-turn-helix DNA-binding domainGENE3D1.10.10.10coord: 372..460
e-value: 1.8E-6
score: 27.5
IPR002182NB-ARCPFAMPF00931NB-ARCcoord: 138..418
e-value: 4.8E-48
score: 163.6
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 735..749
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 651..665
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 1154..1168
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 777..791
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 630..1202
score: 53.732
IPR017986WD40-repeat-containing domainSUPERFAMILY50978WD40 repeat-likecoord: 626..912
IPR017986WD40-repeat-containing domainSUPERFAMILY50978WD40 repeat-likecoord: 967..1252
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 118..389
IPR011029Death-like domainSUPERFAMILY47986DEATH domaincoord: 1..92

Blast
BLAST of TCONS_00053584-protein vs. Swiss-Prot (Human)
Match: APAF (Apoptotic protease-activating factor 1 OS=Homo sapiens GN=APAF1 PE=1 SV=2)

HSP 1 Score: 583.178 bits (1502), Expect = 0.000e+0
Identity = 397/1292 (30.73%), Postives = 658/1292 (50.93%), Query Frame = 0
Query:    1 MNEEQRFILISNRKAISQDLLVGDVFSYFQSKFVLDIDEVELIKGELTSREKAEKLVETLLSKKRNFFRHFYKSLKFAEYYHLCELLESGMDDVESSDEDGSSSSDDEDSDVGDLPKVETILRNGGVPQIPQIFVDRQQCIQQIQDALNALEDDIGWVVFHGMAGSGKTLLASDGLNNEPLVHRCFPGGIFWVNVGKVDNARLLMKMQNLCHWLDNDGLY--RTPKNVEEARDRLRILFSLEHPKSLLVLDDVWSDNVLKYFDVRCRTLLITRNPAIANTLSGNIINVQIKETLTFSQSQQVLALWTNMEIKDLPEESNSIINQCKGSPLAISMIGALLKGHKNRWSYYVKQLDEQKISKVKSKLSYDYTSLYDAFAVSFNDLSDELQEHFEKLSIFNESIGIPVETLSILWDCDEVETEDMMDELIGRSLVTSNTSNEDDEKKTCYFVHDIQLGFIKEKMTEKKKIKGFHQLLI---ERYLERHGDFKDIPDDGYIHWYLISHLIMADDVTTAVQLMKDLFWLQRCLDFTSPVSLITQF---NSLLDAMSSS-STNYQESVELLSDIRRLIGAHSHLFASEDDKMNFTQLALIQPSSNQVFKIALESGKTKLKEKSDS--VFYQWLNRPKEIQDDLTLSIKVHVDQV-NCCRLDHSKENPTVVSCGSDHLVKVWDSVNGKILSTLEGHSDSVNCCCFSSDDKRIITASSDCTIRTWSLMNETELKCLRGHRSDVLCCQCSNDDQ--FLCSASVDSTVKIWDMETGFLVCSFDEHEDVVNWCCFSHDSKMVASCSNDQSLKIWDIESRECQTQWCDEDF--------------IAFCIFTPDDEQVLYTIGDQIKIFNLSDEMVEKTIETP--SDVLSLAFSPDQQYLASAHTDMSARLYDLENEVFVRVYTGHSSWLTSVCFCQSNRTLVTSSADGICNVWSLNTE-NYSTEKLIPVFDASFLDPEHPLIAACSNKNQVKMFRMI-GLAGESPAF-KMSISSCKISRNEKMLAVGLANGNIEVMEIKTVEDSPKISFHQSSTFEKHKKAIVKLEFTRSDE-LLMSCDEEIITIWDVASKELYRTYEYHTETITKCLTFDNGKYLASTSYDGNFKIMNVETNLEVFGYENEENAMMSCTATLDNKMVAACSSNNQCKIWSFDEGQLLHTLE-ENDVIRTIQFSGDNKFIATGCDNGSVKIWNTKTGRL--------KTEMKDHTGWITDIKFDRKSHLVQTVSDNLKFFN-TKGDRLQTIPLIGHYLTAVLPSDDFTLCITVDNQGYLYVLQ 1248
            M+ + R  L+ +R+A+ +D+    +  +  S   L I E E ++ E T +++A  L++ +L K  + +  FY +L    Y  L  LL  G+  V SS    S S             V T+L  GGVPQ P +FV R++ +  IQ  L+ L+ + GWV  HGMAG GK++LA++ + +  L+  CFPGG+ WV+VGK D + LLMK+QNLC  LD D  +  R P N+EEA+DRLRIL   +HP+SLL+LDDVW   VLK FD +C+ LL TR+ ++ +++ G    V ++ +L   +  ++L+L+ NM+  DLPE+++SII +CKGSPL +S+IGALL+   NRW YY+KQL  ++  +++   SYDY +L +A ++S   L +++++++  LSI  + + +P + L ILWD +  E ED++ E + +SL+  + +     K   Y++HD+Q+ F+ EK     +++  H+ +I   +RY + H    D  D  Y + +L  H+  A        LM  L W++   +   P  LI +F     +LD    + S N+QE + L          + HL   +    N  QL L +P +++V++ A    K + K++ D+  ++ +W+N+ K I +   L ++ H D V + C    S++   + SCG+D  ++V+ +  G+ L  ++ H D V CC FS+DD+ I T S D  ++ W+ M    +     H   V CC  +N      L + S D  +K+WD+       +   H + VN C FS D K++ASCS D +LK+WD  S   +     + F              +  C ++ D  +++    ++I +F++    +   I T   S +    FSP       A +     L++ ++   V    GH SW+  V F     + +TSS D    +W        S   L    D  F + E  ++A     + ++  ++I G  G+     +  +S C +S + + +A G  NG IE++E+        ++     +  +HKK +  ++FT  ++ L+ S D+  I +W+    +       H ET+       N + L S S+DG  K+ N+ T  +   +   +  ++SC  + D    ++ S++   KIWSFD    LH L   N  +R   FS D+  +ATG DNG ++IWN   G L        +     H GW+TD+ F     ++ +    +K++N   G+  QT    G  L  +  S DF   +TVDN G LY+LQ
Sbjct:    1 MDAKARNCLLQHREALEKDIKTSYIMDHMISDGFLTISEEEKVRNEPTQQQRAAMLIKMILKKDNDSYVSFYNALLHEGYKDLAALLHDGIPVVSSSSGKDSVSGITS--------YVRTVLCEGGVPQRPVVFVTRKKLVNAIQQKLSKLKGEPGWVTIHGMAGCGKSVLAAEAVRDHSLLEGCFPGGVHWVSVGKQDKSGLLMKLQNLCTRLDQDESFSQRLPLNIEEAKDRLRILMLRKHPRSLLILDDVWDSWVLKAFDSQCQILLTTRDKSVTDSVMGPKYVVPVESSLGKEKGLEILSLFVNMKKADLPEQAHSIIKECKGSPLVVSLIGALLRDFPNRWEYYLKQLQNKQFKRIRKSSSYDYEALDEAMSISVEMLREDIKDYYTDLSILQKDVKVPTKVLCILWDMETEEVEDILQEFVNKSLLFCDRNG----KSFRYYLHDLQVDFLTEKNCS--QLQDLHKKIITQFQRYHQPHTLSPDQEDCMYWYNFLAYHMASAKMHKELCALMFSLDWIKAKTELVGPAHLIHEFVEYRHILDEKDCAVSENFQEFLSL----------NGHLLGRQPFP-NIVQLGLCEPETSEVYQQA----KLQAKQEVDNGMLYLEWINK-KNITNLSRLVVRPHTDAVYHAC---FSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSTDDRFIATCSVDKKVKIWNSMTGELVHTYDEHSEQVNCCHFTNSSHHLLLATGSSDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDATSANERKSINVKQFFLNLEDPQEDMEVIVKCCSWSADGARIMVAAKNKIFLFDIHTSGLLGEIHTGHHSTIQYCDFSPQNHLAVVALSQYCVELWNTDSRSKVADCRGHLSWVHGVMFSPDGSSFLTSSDDQTIRLWETKKVCKNSAVMLKQEVDVVFQENEVMVLAV----DHIRRLQLINGRTGQIDYLTEAQVSCCCLSPHLQYIAFGDENGAIEILEL--------VNNRIFQSRFQHKKTVWHIQFTADEKTLISSSDDAEIQVWNWQLDKCI-FLRGHQETVKDFRLLKNSRLL-SWSFDGTVKVWNIITGNKEKDFVCHQGTVLSCDISHDATKFSSTSADKTAKIWSFDLLLPLHELRGHNGCVRCSAFSVDSTLLATGDDNGEIRIWNVSNGELLHLCAPLSEEGAATHGGWVTDLCFSPDGKMLISAGGYIKWWNVVTGESSQTFYTNGTNLKKIHVSPDFKTYVTVDNLGILYILQ 1245          
The following BLAST results are available for this feature:
BLAST of TCONS_00053584-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
APAF0.000e+030.73Apoptotic protease-activating factor 1 OS=Homo sap... [more]
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