TCONS_00053572-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00053572-protein
Unique Name	TCONS_00053572-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	713

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00053572-protein ID=TCONS_00053572-protein|Name=TCONS_00053572-protein|organism=Clytia hemisphaerica|type=polypeptide|length=713bp
MTCNSHLWTVLLLVCCGVGTSDARYIYIHPFWVWIQPEDVSVVSVDTKRD
LNGRLHHTDQFKTDAMVVRRGQEFLLDVKLSTTFDPSLHSISLELRTGSR
PNTYERTLVKIPMVKYLDKIKWGMRIVGKSDSTLQLKINIPARCLIANYE
LRIVNNLRKVLYTHKQPVYILFNPWSTEDEVYMPNASHLEEYVLNDQGVL
FQGSANHISPLRWYFGQFEKISLESAFALLSTTKIRERDTARDISRRIAA
LVNSNDERGVLQGRWGSDFTGGTEPWAWTGSPAILEEYTKTKQPVKYGQC
WNFCGLTTTLLRVVGIPTRAISNFNSAHDTDGNCTYDRFYDQNGEFLSRM
SRDSTWNFHCWSDAWMERPDLPPGYGGWQAVDGTPQERSNGRYQTGPAPL
RAIKEGNVKLKHDVRFLFAEVNADTVYWSRLSPDQEFRPIRVDRKLIGQN
ISTKAIGREQYRRVDITEDYKYPEGSALELITSQRALHLTNNKIVSDTVD
DLKYSLYAQNEVMVGKDVVLRLHIKNTAVNNRNVQIMVGGHVLTYNGIAI
KKLPMRKTHEMVHRQTDTYHTVSFAASQYLSLLKQSPRLRFHVFSSCSET
SQIYVTETIVTLGRPELVFEQLPSYWKKGEELRFTVRVQNPLRLELTDCV
LWLDGNIMESRLSLPQRNIPANSFHQVNIALVPQYEGRKNMIVTFSSKQL
GGFRGSSFIDIRS

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_033810	XLOC_033810	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00053572	TCONS_00053572	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002931	Transglutaminase-like
IPR013783	Ig-like_fold
IPR023608	Transglutaminase_animal
IPR001102	Transglutaminase_N
IPR008958	Transglutaminase_C
IPR014756	Ig_E-set

Vocabulary: **Biological Process**
Term	Definition
GO:0018149	peptide cross-linking

Vocabulary: **Molecular Function**
Term	Definition
GO:0003810	protein-glutamine gamma-glutamyltransferase activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0018149	peptide cross-linking
molecular_function	GO:0003810	protein-glutamine gamma-glutamyltransferase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002931	Transglutaminase-like	SMART	SM00460	TG_5	coord: 292..385 e-value: 1.2E-40 score: 151.0
IPR002931	Transglutaminase-like	GENE3D	3.90.260.10		coord: 181..493 e-value: 8.9E-121 score: 402.2
IPR002931	Transglutaminase-like	PFAM	PF01841	Transglut_core	coord: 296..382 e-value: 2.0E-13 score: 50.6
IPR013783	Immunoglobulin-like fold	GENE3D	2.60.40.10		coord: 620..713 e-value: 1.2E-5 score: 25.2
IPR013783	Immunoglobulin-like fold	GENE3D	2.60.40.10		coord: 35..180 e-value: 4.6E-37 score: 127.1
IPR013783	Immunoglobulin-like fold	GENE3D	2.60.40.10		coord: 494..615 e-value: 4.5E-15 score: 55.1
IPR023608	Protein-glutamine gamma-glutamyltransferase, animal	PIRSF	PIRSF000459	TGM_EBP42	coord: 36..713 e-value: 1.2E-197 score: 655.7
IPR001102	Transglutaminase, N-terminal	PFAM	PF00868	Transglut_N	coord: 40..153 e-value: 9.3E-28 score: 96.9
IPR008958	Transglutaminase, C-terminal	PFAM	PF00927	Transglut_C	coord: 506..606 e-value: 1.3E-6 score: 28.4
IPR008958	Transglutaminase, C-terminal	SUPERFAMILY	49309	Transglutaminase, two C-terminal domains	coord: 502..612
IPR008958	Transglutaminase, C-terminal	SUPERFAMILY	49309	Transglutaminase, two C-terminal domains	coord: 622..711
None	No IPR available	SUPERFAMILY	54001	Cysteine proteinases	coord: 179..489
IPR014756	Immunoglobulin E-set	SUPERFAMILY	81296	E set domains	coord: 27..177

Blast

[Close]

BLAST of TCONS_00053572-protein vs. Swiss-Prot (Human)
Match: TGM4 (Protein-glutamine gamma-glutamyltransferase 4 OS=Homo sapiens GN=TGM4 PE=1 SV=2)

HSP 1 Score: 410.994 bits (1055), Expect = 4.125e-134
Identity = 240/685 (35.04%), Postives = 372/685 (54.31%), Query Frame = 0

Query:   38 EDVSVVSVDTKRDLNGRLHHTDQFKTDAMVVRRGQEFLLDVKLSTTFDPSLHSISLELRTGSRPNTYERTLVKIPMVKYLDKIKWGMRIVGKSDSTLQLKINIPARCLIANYELRIVNNLRKVLYTHKQPVYILFNPWSTEDEVYMPNASHLEEYVLNDQGVLFQGSANHISPLRWYFGQFEKISLESAFALLSTTKIRERDTARD---ISRRIAALVNSNDERGVLQGRWGSDFTGGTEPWAWTGSPAILEEYTKTKQPVKYGQCWNFCGLTTTLLRVVGIPTRAISNFNSAHDTDGNCTYDRFYDQNGEFLSRMSRDSTWNFHCWSDAWMERPDLPPGYGGWQAVDGTPQERSNGRYQTGPAPLRAIKEGNVKLKHDVRFLFAEVNADTVYW--SRLSPDQEFRPIRVDRKLIGQNISTKAIGREQYRRVDITEDYKYPEGSALELITSQRA-LHLTNNKIVSDTVDDLKYSLYAQ-NEVMVGKDVVLRLHIKNTAVNNRNVQIMVGGHVLTYNGIAIKKL-PMRKTHEMVHRQTDTYHTVSFAASQY---LSLLKQSPRLRFHVFSSCSETSQIYVTETIVTLGRPELVFEQLPSYWKKGEELRFTVRVQNPLRLELTDCVLWLDGNIMESRLSLPQRNIPANSFHQVNIALVPQYEGRKNMIVTFSSKQLGGFRGSSFIDI 711
            +++ V+ +D     N   HHT +F+T + V RRGQ F L + L+     S H + LE  TG  P+  + TLV +      D   W   +  +S   + + +      ++  Y+L  V     +L + +  +Y+LFNPW  ED V+MP+    +EY+LND G  + G+A  I    W FGQFEK  L+   +LL+ + ++  D  RD   + R + A+++    +GVL G W  D+ GGT P+ WTGS  IL++Y  TKQ V +GQCW F G+ TT+LR +GIP R+++ F+SAHDT+ N T D + ++NGE ++ M+ DS WNFH W+DAWM+RPDLP GY GWQAVD TPQERS G +  GP+PL AI++G++ + +D RF+F+EVN D + W    ++  +E   I ++   IG+NISTKA+G++  RR DIT +YKYPEGS+ E      A L L++ +     V +    +  Q ++V++G  V   + +K      +NV I+    +  Y G  + KL  + KT ++  + ++   T++  +  Y   L++L   P +R  + +   E+ +I  +E   +   PE   E LP+  + G+ L      +N L + LTD    L+   + S  +     +      Q  I   P   G K  IV  SSKQ+        + I
Sbjct:    6 KELQVLHIDFLNQDNAVSHHTWEFQTSSPVFRRGQVFHLRLVLNQPLQ-SYHQLKLEFSTGPNPSIAKHTLVVLDPRTPSDHYNWQATLQNESGKEVTVAVTSSPNAILGKYQLN-VKTGNHILKSEENILYLLFNPWCKEDMVFMPDEDERKEYILNDTGCHYVGAARSIKCKPWNFGQFEKNVLDCCISLLTESSLKPTD-RRDPVLVCRAMCAMMSFEKGQGVLIGNWTGDYEGGTAPYKWTGSAPILQQYYNTKQAVCFGQCWVFAGILTTVLRALGIPARSVTGFDSAHDTERNLTVDTYVNENGEKITSMTHDSVWNFHVWTDAWMKRPDLPKGYDGWQAVDATPQERSQGVFCCGPSPLTAIRKGDIFIVYDTRFVFSEVNGDRLIWLVKMVNGQEELHVISMETTSIGKNISTKAVGQD--RRRDITYEYKYPEGSSEERQVMDHAFLLLSSEREHRRPVKENFLHMSVQSDDVLLGNSVNFTVILKRKTAALQNVNILGSFELQLYTGKKMAKLCDLNKTSQIQGQVSEV--TLTLDSKTYINSLAILDDEPVIRGFIIAEIVESKEIMASEVFTSFQYPEFSIE-LPNTGRIGQLLVCNCIFKNTLAIPLTDVKFSLESLGISSLQTSDHGTVQPGETIQSQIKCTPIKTGPKKFIVKLSSKQVKEINAQKIVLI 682

The following BLAST results are available for this feature:

BLAST of TCONS_00053572-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00053572-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
TGM4	4.125e-134	35.04	Protein-glutamine gamma-glutamyltransferase 4 OS=H...	[more]

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TCONS_00053572-protein (polypeptide) - C. hemisphaerica