|
Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00053283-protein ID=TCONS_00053283-protein|Name=TCONS_00053283-protein|organism=Clytia hemisphaerica|type=polypeptide|length=2398bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00053283-protein vs. Swiss-Prot (Human)
Match: MATN2 (Matrilin-2 OS=Homo sapiens GN=MATN2 PE=1 SV=4) HSP 1 Score: 199.134 bits (505), Expect = 1.544e-51 Identity = 135/418 (32.30%), Postives = 201/418 (48.09%), Query Frame = 0
Query: 73 QKTYLKSVKERKLRTIHECCDGWAPHNGECTIPLCKPACQHGTCMKPN--ICSCQKGY--KGKQCSTEIDECQTTSGAKPVCDQICKNLPGSYMCSCKKGYQKINPRDPLHPTCINVNECSISQSLCQCSNPSSSCVATCHDSIGSYHCTCSKGYKLS-GKHLCVDQNECSTNTHGCQHYCYNNHGKYSCGCKNGYTLNPLDGKTCLDIDECKYANGGCEQICHNKPGAYSCQCRKGFKLDADKRSCIDEDECSTFKPCDPTLGSCHNTRGSYSCSCKPGYQLDVKGVLCVDIDECLSQRHGCTHKCSNLIGSYQCICPIGYKLSWDRRTCEEINECKVGSHNCQHLCSNTVGSYTCKCRPGFQLNPDGRSCKSLP-CRPLPDISHGKLTCPSTNLGAVCSYACN--NGYRLLGNGQR 482
Q L SV ++KL T H C HN C H P +C C++GY Q + I + + C+Q+C N+PGS++C C GY C+ V+ C++ + C C ++ GSY C C +G+ L+ K C + C+++ HGCQH C N YSC C G+TLNP D KTC I+ C GCE C N +Y C+C +G+ LD + ++C D C+ L C NT S+ C C G+ ++ C +D CL HGC + C N+ S+ C CP G+ L D +TC +++ C +G H C+H C ++ S+ C+C G+ L DG++C+ C+ I HG C + + SY C G+RL +G+R
Sbjct: 224 QIETLTSVFQKKLCTAHMC--STLEHN-----------CAHFCINIPGSYVCRCKQGYILNSDQTTCRIQD--LCAMEDHNCEQLCVNVPGSFVCQCYSGYALAEDG----KRCVAVD---------YCASENHGCEHECVNADGSYLCQCHEGFALNPDKKTCTKIDYCASSNHGCQHECVNTDDSYSCHCLKGFTLNP-DKKTCRRINYCALNKPGCEHECVNMEESYYCRCHRGYTLDPNGKTCSRVDHCAQQDHGCEQL--CLNTEDSFVCQCSEGFLINEDLKTCSRVDYCLLSDHGCEYSCVNMDRSFACQCPEGHVLRSDGKTCAKLDSCALGDHGCEHSCVSSEDSFVCQCFEGYILREDGKTCRRKDVCQA---IDHG---CEHICVNSDDSYTCECLEGFRLAEDGKR 604 HSP 2 Score: 182.57 bits (462), Expect = 2.354e-46 Identity = 124/371 (33.42%), Postives = 167/371 (45.01%), Query Frame = 0
Query: 121 ICSCQKGY----KGKQCSTEIDECQTTSGAKPVCDQICKNLPGSYMCSCKKGYQKINPRDPLHPTCINVNECSISQSLCQCSNPSSSCVATCHDSIGSYHCTCSKGYKLS-GKHLCVDQNECSTNTHGCQHYCYNNHGKYSCGCKNGYTLNPLDGKTCLDIDECKYANGGCEQICHNKPGAYSCQCRKGFKLDADKRSCIDEDEC-----------------------------STFKPCDP----TLG------SCHNTRGSYSCSCKPGYQLDVKGVLCVDIDECLSQRHGCTHKCSNLIGSYQCICPIGYKLSWDRRTCEEINECKVGSHNCQHLCSNTVGSYTCKCRPGFQLNPDGRSCKSLPCRPL 447
+C C GY GK+C +D C + + C+ C N GSY+C C +G+ +P TC ++ C+ S CQ C ++ SY C C KG+ L+ K C N C+ N GC+H C N Y C C GYTL+P +GKTC +D C + GCEQ+C N ++ CQC +GF ++ D ++C D C S K C LG SC ++ S+ C C GY L G C D C + HGC H C N SY C C G++L+ D + C + CK H C+H+C N SY CKC GF L DGR CK P+
Sbjct: 302 VCQCYSGYALAEDGKRC-VAVDYCASENHG---CEHECVNADGSYLCQCHEGF----ALNPDKKTCTKIDYCASSNHGCQ---------HECVNTDDSYSCHCLKGFTLNPDKKTCRRINYCALNKPGCEHECVNMEESYYCRCHRGYTLDP-NGKTCSRVDHCAQQDHGCEQLCLNTEDSFVCQCSEGFLINEDLKTCSRVDYCLLSDHGCEYSCVNMDRSFACQCPEGHVLRSDGKTCAKLDSCALGDHGCEHSCVSSEDSFVCQCFEGYILREDGKTCRRKDVCQAIDHGCEHICVNSDDSYTCECLEGFRLAEDGKRCRRKDVCKSTHHGCEHICVNNGNSYICKCSEGFVLAEDGRRCKKCTEGPI 654 HSP 3 Score: 139.043 bits (349), Expect = 1.057e-32 Identity = 82/224 (36.61%), Postives = 114/224 (50.89%), Query Frame = 0
Query: 279 CKYANGGCEQICHNKPGAYSCQCRKGFKLDADKRSCIDEDECSTFKPCDPTLGSCHNTRGSYSCSCKPGYQLDVKGVLCVDIDECLSQRHGCTHKCSNLIGSYQCICPIGYKLSWDRRTCEEINECKVGSHNCQHLCSNTVGSYTCKCRPGFQLNPDGRSCKSLPCRPL--PDISHGKLTCPSTNLGAVCSYACNNGYRLLGNGQRQCQEAQKWSGLEERCEPL 500
C C C N PG+Y C+C++G+ L++D+ +C +D C+ L C N GS+ C C GY L G CV +D C S+ HGC H+C N GSY C C G+ L+ D++TC +I+ C +H CQH C NT SY+C C GF LNPD ++C+ + L P H C + C C+ GY L NG + C + + CE L
Sbjct: 242 CSTLEHNCAHFCINIPGSYVCRCKQGYILNSDQTTCRIQDLCAMEDHNCEQL--CVNVPGSFVCQCYSGYALAEDGKRCVAVDYCASENHGCEHECVNADGSYLCQCHEGFALNPDKKTCTKIDYCASSNHGCQHECVNTDDSYSCHCLKGFTLNPDKKTCRRINYCALNKPGCEH---ECVNMEESYYCR--CHRGYTLDPNG-KTCSRVDHCAQQDHGCEQL 457 The following BLAST results are available for this feature:
BLAST of TCONS_00053283-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
|
