TCONS_00053193-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00053193-protein
Unique NameTCONS_00053193-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length638

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00053193-protein ID=TCONS_00053193-protein|Name=TCONS_00053193-protein|organism=Clytia hemisphaerica|type=polypeptide|length=638bp
MPQKFFFKDAEFSAEVYHQYPNKEQTAPIIVIDNGSHSCRVGWSNEAEPR
LLFRNLIAKLRGKKESEAGSQFFGNDITDLEDLKWNVRTQFDMDTVSHMD
TQESAFDYMFSHLGINTESINHPVSLTEAVCTPNAFRDHMSELLFECYTV
PNIIYSVDSLLSWYHNKSIDIKDGLILRCGYQTSHVLPIVDGQFKPADSR
RLNVGGLNMMIFLRRLLQLRHPTQMGNFNLSRAQELLIGHSYIASDYFEE
LKKWQTAAFTNEKALTIQLPIINTTTEKDLELRKTQARRLKDINQKKREE
KIKNEKEQLKKFQEIEELEYTNMTLFKQRLKQEGLQKDTDLHTIIKELED
KILERQEKSRKYLMGLNHCESEEEAVSLDDILKLIANLEDEKLQLTDKRR
SRNSRKQALSKRKSYASKERMRILSQLAKGDNPNPKAQKEDTFGMKDEDW
DVYKYINKDGSESEDEADQERLNEIEQHLSQHQLTMNRLMVGRGQVYQHL
PYDTEQVRVPEILYQPSVVGVEQEGISGMIEYVLKNYSPEKQAQMVQNVL
CTGGPTLLPGFQSRLESEVMALLPFQSKFNVTMSKNALLDSWYGARDFVN
NNDLSTISISREEYEEQGAGYFKEHFCSNVFVKLDDDE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033576XLOC_033576Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00053193TCONS_00053193Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004000Actin
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 290..315
NoneNo IPR availableCOILSCoilCoilcoord: 378..398
NoneNo IPR availableGENE3D3.30.420.40coord: 166..593
e-value: 7.8E-38
score: 129.4
NoneNo IPR availableGENE3D3.30.420.40coord: 21..165
e-value: 1.3E-27
score: 96.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 397..417
NoneNo IPR availableCDDcd00012NBD_sugar-kinase_HSP70_actincoord: 30..205
e-value: 6.60407E-7
score: 47.5835
NoneNo IPR availableSUPERFAMILY53067Actin-like ATPase domaincoord: 497..630
coord: 173..271
NoneNo IPR availableSUPERFAMILY53067Actin-like ATPase domaincoord: 27..165
IPR004000Actin familySMARTSM00268actin_3coord: 27..628
e-value: 6.1E-30
score: 115.5
IPR004000Actin familyPFAMPF00022Actincoord: 28..224
e-value: 8.0E-28
score: 97.1
coord: 437..622
e-value: 4.7E-22
score: 78.1

Blast
[Close]
BLAST of TCONS_00053193-protein vs. Swiss-Prot (Human)
Match: ARP5 (Actin-related protein 5 OS=Homo sapiens GN=ACTR5 PE=1 SV=2)

HSP 1 Score: 235.343 bits (599), Expect = 5.396e-69
Identity = 140/370 (37.84%), Postives = 218/370 (58.92%), Query Frame = 0 
Query:    5 FFFKDAEFSAE-VYHQYPNKEQTAPI-IVIDNGSHSCRVGWSNEA-----EPRLLFRNLIAKLRGKKESEAGSQFFGNDITDLEDLKWNVRTQFDMDTVSHMDTQESAFDYMFSHLGINTES-INHPVSLTEAVCTPNAFRDHMSELLFECYTVPNIIYSVDSLLSWYHNKSID-IKDGLILRCGYQTSHVLPIVDGQFKPADSRRLNVGGLNMMIFLRRLLQLRHPTQMGNFNLSRAQELLIGHSYIASDYFEELKKWQTAAFTNEKALTIQLPIIN------TTTEKDLELRKTQARRLKDINQKKREEKIKNEKEQLKKFQEIEE-LEYTNMTLFKQRLKQEGLQKDTDLHTIIKELEDKILERQEK 358
            F F+DA  + + V    P      P+ +V+DNGS   R GW+        EPRL FR + A+ RG     +G Q  GN +  LE L+W +R+ FD +   +++ QE   DY F HLG++++  ++HP+ LTEAVC P   R  MSELLFECY +P + Y +DSL S+YHNK  + +  GLI+  GYQ +HVLPI++G+    + +R+N+GG     +L+RLLQL++P  +    LSR +E+L  HSYIA DY EEL KW+   +       +QLP  +       T+E+  E R+ Q RRL+++N ++REEK++ ++E+L +   ++E LE   M  F + L +  +    +L + I++L   + + ++K
Sbjct:    6 FPFRDARAAPDPVLEAGPVAHGPLPVPLVLDNGSFQVRAGWACPGQDPGPEPRLQFRAVCARGRGGARGASGPQV-GNALGSLEPLRWMLRSPFDRNVPVNLELQELLLDYSFQHLGVSSQGCVDHPIVLTEAVCNPLYSRQMMSELLFECYGIPKVAYGIDSLFSFYHNKPKNSMCSGLIISSGYQCTHVLPILEGRLDAKNCKRINLGGSQAAGYLQRLLQLKYPGHLAAITLSRMEEILHEHSYIAEDYVEELHKWRCPDYYENNVHKMQLPFSSKLLGSTLTSEEKQERRQQQLRRLQELNARRREEKLQLDQERLDRLLYVQELLEDGQMDQFHKALIELNMDSPEELQSYIQKLSIAVEQAKQK 374

HSP 2 Score: 141.354 bits (355), Expect = 1.850e-35
Identity = 63/140 (45.00%), Postives = 98/140 (70.00%), Query Frame = 0 
Query:  496 VYQHLPYDTEQVRVPEILYQPSVVGVEQEGISGMIEYVLKNYSPEKQAQMVQNVLCTGGPTLLPGFQSRLESEVMALLPFQSKFNVTMSKNALLDSWYGARDF-VNNNDLSTISISREEYEEQGAGYFKEHFCSNVFVKL 634
             Y  L   TE++R PEI++QPS++G EQ GI+  ++Y+L  Y  + Q  +VQNV  TGG T+ PG ++R+E E++ + PF+S F V ++ N +LD+WYGARD+ +N+ D + + I+R+EYEE+G  Y KEH  SN++V +
Sbjct:  438 AYHQLFVGTERIRAPEIIFQPSLIGEEQAGIAETLQYILDRYPKDIQEMLVQNVFLTGGNTMYPGMKARMEKELLEMRPFRSSFQVQLASNPVLDAWYGARDWALNHLDDNEVWITRKEYEEKGGEYLKEHCASNIYVPI 577
The following BLAST results are available for this feature:
BLAST of TCONS_00053193-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ARP55.396e-6937.84Actin-related protein 5 OS=Homo sapiens GN=ACTR5 P... [more]
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