TCONS_00053187-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00053187-protein
Unique NameTCONS_00053187-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length340

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00053187-protein ID=TCONS_00053187-protein|Name=TCONS_00053187-protein|organism=Clytia hemisphaerica|type=polypeptide|length=340bp
MAQQSLDGHVNGELKITIKTEEEDPYFDNTCKDNNVNKTVDLLATEPRTD
DLIKIKTETESDRASAKKLKVNSRENGNPASFVPGSHLHDVDGSNVLSTP
GLKTVIEIRHSNSPVSVFEKRSVLNAKADELLRKKHPAGNIQHFRKLFKC
KECGAGFTSNFSMQRHMWIHTDKKPFQCRYCGAKLSRKDKLKDHEDGHVG
MYKYKKRERSIKPSKPCGNCGKTFQLKILSLQCNHAGEKHDHVCELNTKK
VTENFLTSSERHVGETKINQCCECGKCFANKLLLADHISIVHRSFSFIMC
NVCGYTSRSKSVSTRHQTLHHPNMDFDFSLFEASFCEECG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033570XLOC_033570Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00053187TCONS_00053187Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 176..198
e-value: 0.35
score: 19.9
coord: 298..320
e-value: 1.7
score: 17.6
coord: 269..292
e-value: 0.39
score: 19.8
coord: 148..170
e-value: 0.028
score: 23.6
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 271..292
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 150..170
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 178..198
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 176..203
score: 9.951
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 269..292
score: 9.245
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 148..175
score: 14.17
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 267..320
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 146..198
NoneNo IPR availablePFAMPF16622zf-C2H2_11coord: 270..292
e-value: 3.9E-5
score: 23.2
coord: 148..169
e-value: 1.7E-5
score: 24.3
NoneNo IPR availableGENE3D3.30.160.60coord: 279..308
e-value: 6.5E-7
score: 28.9
coord: 160..184
e-value: 8.1E-16
score: 57.4
NoneNo IPR availableGENE3D3.30.160.60coord: 219..278
e-value: 0.014
score: 15.2
NoneNo IPR availableGENE3D2.20.28.10coord: 309..340
e-value: 6.6E-4
score: 19.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 63..88
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 185..218
e-value: 4.5E-5
score: 22.9
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 15..159
e-value: 1.8E-7
score: 30.8

Blast
[Close]
BLAST of TCONS_00053187-protein vs. Swiss-Prot (Human)
Match: ZFP69 (Zinc finger protein ZFP69 OS=Homo sapiens GN=ZFP69 PE=2 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 6.600e-20
Identity = 80/268 (29.85%), Postives = 113/268 (42.16%), Query Frame = 0 
Query:   99 TPGLKTVIEIRHSNSPVSVFEKRSVLNAKADELLRKKHPAGNIQHFR-----KLFKCKECGAGFTSNFSMQRHMWIHTDKKPFQCRYCGAKLSRKDKLKDHEDGHVGMYKY---------------KKRERSIKPSKP--CGNCGKTF-QLKILSLQCN-HAGEKHDHVCELNTKKVTEN-FLTSSER-HVGETKINQCCECGKCFANKLLLADHISIVHRSFSFIMCNVCGYTSRSKSVSTRHQTLHHPNMDFDFSLFEASFCEECG 340
            TP  +   ++   N P S    ++      +++   K P    +H R     K F+CKECG  F+ + S+  H  IHT +KPF+C  CG     +  L  H   H G   Y                +  R+    KP  C  CGKTF Q++ LS     H GEK  + C    K  +   +LT  +R H GE +  +C ECGK F  ++ L++H   VH       CN CG   R  S   +HQ  H     ++        C ECG
Sbjct:  247 TPTKRNTYKLDLINHPTSYIRTKTYECNICEKIF--KQPIHLTEHMRIHTGEKPFRCKECGRAFSQSASLSTHQRIHTGEKPFECEECGKAFRHRSSLNQHHRTHTGEKPYVCDKCQKAFSQNISLVQHLRTHSGEKPFTCNECGKTFRQIRHLSEHIRIHTGEK-PYACTACCKTFSHRAYLTHHQRIHTGE-RPYKCKECGKAFRQRIHLSNH-KTVHTGVKAYECNRCGKAYRHDSSFKKHQRHHTGEKPYE--------CNECG 501
The following BLAST results are available for this feature:
BLAST of TCONS_00053187-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZFP696.600e-2029.85Zinc finger protein ZFP69 OS=Homo sapiens GN=ZFP69... [more]
back to top