TCONS_00053059-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00053059-protein
Unique Name	TCONS_00053059-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	552

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00053059-protein ID=TCONS_00053059-protein|Name=TCONS_00053059-protein|organism=Clytia hemisphaerica|type=polypeptide|length=552bp
MNAIIALCHFCEAHGPSILFCTQPFHCQNHTPNDIRNGVAPSPSLCGITY
KRHNSDSSVSEATNESPEKPKSSTIPKPSTCEGCRSIEPGQPGYISIDRE
YHISYISSQHPDEPELFAVLRHACVRSLSCEVCPGREGPIMFGDESSGYV
FSHTFHLKDLQSRGFQRWYSLICVMMDRIFLVNSWQFLISNFKGIIDELQ
HKSERVYKEEQSSSKGPQSAEVLLHQPRNTLYPDQFRRVGQVYRSLADIT
KDTDVFQYLHKMFGWILKAGGIERYTEKVLVGPPVEEYLLDENNQGETEF
DKEIHDLLNDQNEDGPIFQSLIQMHKILGNANFLKMAYHVVRGDQLVVRG
KYKRTAASVLETAKFLVPAGCVQGCRYHEPEYVDSFRCNFLGLQEEAQVP
DHVLESDLFVLVDITTDKEEIEKSTVKSHFSSIDSSFDGTVFTVAGADAG
KEPTYLKHVIQALKDETINDKVFQLILVTLKEQWMGKVKVMFKFSKTGMR
TKDDKQKLLNILDATVDDEILLKYWMTSLSQSYRTHLLETSSSSSQDSKE
TT

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_033514	XLOC_033514	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00053059	TCONS_00053059	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR032035	Folliculin_C

Vocabulary: **Molecular Function**
Term	Definition
GO:0005085	guanyl-nucleotide exchange factor activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005085	guanyl-nucleotide exchange factor activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032035	Folliculin, C-terminal	PFAM	PF16692	Folliculin_C	coord: 316..538 e-value: 1.8E-58 score: 197.8
None	No IPR available	PFAM	PF11704	Folliculin	coord: 103..269 e-value: 4.8E-54 score: 182.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..81

Blast

[Close]

BLAST of TCONS_00053059-protein vs. Swiss-Prot (Human)
Match: FLCN (Folliculin OS=Homo sapiens GN=FLCN PE=1 SV=1)

HSP 1 Score: 419.468 bits (1077), Expect = 6.763e-141
Identity = 238/590 (40.34%), Postives = 331/590 (56.10%), Query Frame = 0

Query:    1 MNAIIALCHFCEAHGPSILFCTQPFHCQNHTPNDIRNGVAPSPSLCGITYKRHNSDSSVSEATNESPEKPKS--STIPKPS---TCEGCRSIEPGQPGYISIDREYHISYISSQHPDEPELFAVLRHACVRSLSCEVCPGREGPIMFGDESSGYVFSHTFHLKDLQSRGFQRWYSLICVMMDRIFLVNSWQFLISNFKGIIDELQHKSERVYKEEQSSSKGPQSAEVLLHQPRNTLY-PDQFRRVGQVYRSLADITKDTDVFQYLHKMFGWILKAGGIERYTEKVLVGPPVEEYLLDENNQGETEFDKEIHDLLNDQNEDG----------------------------------PIFQSLIQMHKILGNANFLKMAYHVVRGDQLVVRGKYKRTAASVLETAKFLVPAGCVQGCRYHEPEYVDSFRCNFLGLQEEAQVPDHVLESDLFVLVDITTDKEEIEKSTVKSHFSSIDSSFDGTVFTV-AGADAGKE---PTYLKHVIQALKDETINDKVFQLILVTLKEQWMGKVKVMFKFSKTGMRTKDDKQKLLNILDATVDDEI-LLKYWMTSLSQSYRTHLLETSSSSS 545
            MNAI+ALCHFCE HGP  LFCT+  H     P    +G   SP       +        S     SP +  S  S+ P P     CEGCRS+  G PGYIS D+E  I Y+S QHP  P+LF+++R ACVRSLSCEVCPGREGPI FGDE  G+VFSHTF +KD  +RGFQRWYS+I +MMDRI+L+NSW FL+   +GIIDELQ K+ +V++ EQ     PQ A+ +     NT + P   +R G   RSL  +T D +++  LH  F W+LKA G  R TEK+L G P E+ L+      + E + E  D    + E+                                   P+F+SL  M ++LG  +F  +A+HV+ G+Q++ + +      S  E  + ++P GCV+   Y   +Y +++RCNFLGL    Q+P HVL S+  V+V++        +ST+       D S     F V +G+    +   PT L  +  AL ++ ++  V    LV LKE+WM KVKV+FKF+K   R K+D QKLL+IL A+ +D + LLK+WMT LS++Y++HL+ T  S +
Sbjct:    1 MNAIVALCHFCELHGPRTLFCTEVLH----APLPQGDGNEDSPGQGEQAEEEEGGIQMNSRMRAHSPAEGASVESSSPGPKKSDMCEGCRSLAAGHPGYISHDKETSIKYVSHQHPSHPQLFSIVRQACVRSLSCEVCPGREGPIFFGDEQHGFVFSHTFFIKDSLARGFQRWYSIITIMMDRIYLINSWPFLLGKVRGIIDELQGKALKVFEAEQFGC--PQRAQRM-----NTAFTPFLHQRNGNAARSLTSLTSDDNLWACLHTSFAWLLKACG-SRLTEKLLEGAPTEDTLVQMEKLADLEEESESWDNSEAEEEEKAPVLPESTEGRELTQGPAESSSLSGCGSWQPRKLPVFKSLRHMRQVLGAPSFRMLAWHVLMGNQVIWKSRDVDLVQSAFEVLRTMLPVGCVRIIPYSS-QYEEAYRCNFLGLSPHVQIPPHVLSSEFAVIVEV----HAAARSTLHPVGCEDDQSLSKYEFVVTSGSPVAADRVGPTILNKIEAALTNQNLSVDVVDQCLVCLKEEWMNKVKVLFKFTKVDSRPKEDTQKLLSILGASEEDNVKLLKFWMTGLSKTYKSHLMSTVRSPT 573

The following BLAST results are available for this feature:

BLAST of TCONS_00053059-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00053059-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
FLCN	6.763e-141	40.34	Folliculin OS=Homo sapiens GN=FLCN PE=1 SV=1	[more]

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TCONS_00053059-protein (polypeptide) - C. hemisphaerica