TCONS_00051915-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00051915-protein
Unique NameTCONS_00051915-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length709

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00051915-protein ID=TCONS_00051915-protein|Name=TCONS_00051915-protein|organism=Clytia hemisphaerica|type=polypeptide|length=709bp
MRLKVLRNILITVLFTFAFIHLVRPTKTKNNEAAVVTTVLDSTSNALDAA
TVNKAKKASTVAGQLTEVSSKASKFSAVLNTGLTQFSTYVYGVTATMAVI
NILWPGTFPEGEPAHVAEMRAYFEELKAEFRVVKNQINDLKLYVQERSTD
QVYAGYILSIHTMELYFQEYTDSSDALREAYGESFAANYDQLGNHADHLY
TGLVITNDNLNIGKNAISYTKGDRSKVLKIMFELFNVINMGIKHEALYYR
LKDDTEQIDVLADRWATRMNNLQNVMKAIDDEIVEGAKEQMETDLNENVV
ELKNNDNQVMSENLYTFFSEKYYWKDWVVIVYSKSVKGHDNHAYSYCSNN
AVFRMRLGNGVDKTMYLFHIDKASGSWMTKTQAKNILKTGPYTYKDTCYH
GRVRYTCDRPQNDLSKTIDAVKDDLKVCSVTKGIVILKKDKGYGIAPKVA
NRIRGHFLKGEFNAFVIGPWGSSSPQESVEGVTINGGWTSYTDWTSCSQT
CGGGTQTRRRYCRNPVAQDGGRVCSGQDTQSKSCNTFSCFSKTFLTDKIE
KIMSSKKSLNNEEFAEHLREQLKTTYPEYRFSVNTYNSISGSDKHSMQGY
HYVNIFRKHGRNVVVAFTKKTNSVPNSSTLKAIEERIVAAIKNKGKDAKK
SRELAWTALKKEGYRVAMVLVVRFGNGLRSRSTGGGIFFENFNSSGSHKS
SLVVMLGKA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032857XLOC_032857Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00051915TCONS_00051915Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000884TSP1_rpt
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01705TSP1REPEATcoord: 486..499
score: 36.61
coord: 523..534
score: 33.33
coord: 504..515
score: 46.58
IPR000884Thrombospondin type-1 (TSP1) repeatSMARTSM00209TSP1_2coord: 488..540
e-value: 7.4E-13
score: 58.7
IPR000884Thrombospondin type-1 (TSP1) repeatGENE3D2.20.100.10coord: 484..539
e-value: 1.3E-15
score: 56.9
IPR000884Thrombospondin type-1 (TSP1) repeatPFAMPF00090TSP_1coord: 492..539
e-value: 1.1E-9
score: 38.3
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 485..540
score: 13.471
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 484..536

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00051915-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top