TCONS_00050440-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00050440-protein
Unique NameTCONS_00050440-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length519

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00050440-protein ID=TCONS_00050440-protein|Name=TCONS_00050440-protein|organism=Clytia hemisphaerica|type=polypeptide|length=519bp
VNFDTSKTTKLTKGSSNHKYTNTILTYQKCNTLLHRYHLLLNIFSRRHHT
ASVRHSRNMATVQQRTPSRLFPQSEYRVLNGDPDQDLDETVEQEYCVYFS
KRSRNRREDVTYVRQKSFLLKQGAMTLQLQYYQNFYPPNVHSNTPNMKCL
QGNKKTNNQSQGCNFLEYLPKEITFQILRYLTAEQLCKFAGASHAARLFA
YDDLLWKNLCLRTWRHCGFLLIADISDYKHTLRAWFNQSSPSGSERLDVN
EVMQIFDQNRWRIRFATFKTHEETPSIMHRFSSRFNMRTAECFPTKRVVK
YQCAMGEYHLVGVQNAALVEYLIFMLPSPWHRKSFSKIASQPIYNIRHFG
LKTARSPRGQHNGEFFRRRGYYLKTLENRKVHITYRYFPTIRFRLYRNHV
ENRDFIVCQDIFLSSGESVDCYTAYEIVRVGDYQEQREVVQNETLPANPR
EMMRMGADTPFPPIRPAPETNEGEEQRVSAVSSPPMPPHDRSRALGDQPT
LDVSDSSEGETEEDGGGQQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031942XLOC_031942Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00050440TCONS_00050440Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001810F-box_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainPFAMPF12937F-box-likecoord: 167..212
e-value: 2.5E-7
score: 30.4
IPR001810F-box domainPROSITEPS50181FBOXcoord: 163..209
score: 10.531
IPR001810F-box domainSUPERFAMILY81383F-box domaincoord: 157..222
NoneNo IPR availableGENE3D1.20.1280.50coord: 163..297
e-value: 4.9E-12
score: 45.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 443..519

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00050440-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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