TCONS_00048541-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00048541-protein
Unique NameTCONS_00048541-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1302

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00048541-protein ID=TCONS_00048541-protein|Name=TCONS_00048541-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1302bp
MSIRWHWLLPIIFIYNSFAAIDFCHRLARSDANSRNANWFPETCTTQDSE
RGGRCYMKCLPGFSIKPNALASLDCLKINSTTWSRFESEICVRDQFCPPL
GSSIYQNNCRFPNIKPGVSCHMNYSTCSYERMVGPSILKCQSNLTWSEGG
TYCKDEFSVTLTCPTVQSLVEVDPQSNTKDARKIIPLPTVTGLSPSQVIS
PDLNVGVGYQNLKFSINESIGVEKSCFVRFTVTDKEPPVPISCTEEQEQV
IQAGKRGKMVIGKCVFHDNVNGDINGTFNNRVSADGSIAPGVYEHSFFMA
EDSERNNARVYQKYIVHEKKCEHDGPLSDTIELEKMQHLFRVKCKNATFQ
SYIYNMYQFRSQIPVEALTLFVYCSNANFTKFSPILECFPTVKPDNDTKK
CEDGSVLNEGPNLICIPCPRGFEFISNSTGTFCQKCPTNMSTDGLGSLNG
CKQCPSSQMTVGGLPVCKYICKGGESYEGGKCNLCQTGFYADQGATSCIK
CPSGKTTLSERSTSVDHCLPGLTVTSNNGTIDNLNVLKNTSTYVRFDITG
IAENQLHQNIVVRFEGDFSFLCTEGYVQIIGYFEEFKTNVIDRLCGDKAK
GNILFKLRPWRQTSLQIFSNNNMNEIKLNHAYSVCKAGQYHNLTTHQCTD
CQQGTYQNKQNQYSCQPCAAGKTNYGPGMTACIKPCPSGFEGEGLQCKPC
PIGTFEENRQCKQCPNGQSTRFERSTSCEKACSKGEYLNADNTCSKCAYG
RYQPLERHSQRECFYCPKDKTTIKMGSDTIDDCFLGKDQCKYEGQYYNTT
LNSCQDCPIASYKEASGFTPTQCTRCADGETTKQEASIRPSDCIPILTPC
QQHNPCQFPGQCVDKNGNATCVCPRYYTGQFCEKLDGPCKDVDCNNGSCV
PFPNSKYVDHVCICKPGFTGKKCESAHDPCEPNPCYNSNCTNTKPGDYNC
SCPLYWGGKRCEKRLYSPCMNASNCNIRHARCTEDPNVHGKFECKCYRGY
EGPNCDEEIDWCEKFPCQLNNTARCRPLGDGTRECHCKTGFAGETCQNVK
DCGIGQFYHDERCCDCLQGKFHDDNNTVAQCTKCPDGLTTFLRGSRTAQD
CKDVSKEEYLVASFRLPQHTYQGPYDPNDDSCGYLGDTFEQTLFELLKKG
TANSTKGVHLINFRKPPDNKEGLLMVFKVYGNIETNEKELTKIERTASVG
QYWVDAASLDIIETKKGSTTTPPTDEKDKDGLTTGTIIGIVIGILVLVAL
IVLLAVWLRGGLASKLQAKRKSFRSVSPNGSNGSNEHSQLSMKEKTTYNG
AS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030862XLOC_030862Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00048541TCONS_00048541Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001881EGF-like_Ca-bd_dom
IPR011641Tyr-kin_ephrin_A/B_rcpt-like
IPR000742EGF-like_dom
IPR013032EGF-like_CS
IPR009030Growth_fac_rcpt_
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001881EGF-like calcium-binding domainSMARTSM00179egfca_6coord: 1008..1047
e-value: 0.089
score: 10.3
coord: 926..962
e-value: 0.027
score: 14.5
coord: 850..883
e-value: 0.12
score: 9.2
coord: 891..924
e-value: 0.088
score: 10.3
IPR011641Tyrosine-protein kinase ephrin type A/B receptor-likeSMARTSM01411GCC2_GCC3_2coord: 689..728
e-value: 8.7E-5
score: 31.9
coord: 794..843
e-value: 6.1E-8
score: 42.4
coord: 735..783
e-value: 2.0E-7
score: 40.7
coord: 474..518
e-value: 2.8E-8
score: 43.5
coord: 404..454
e-value: 0.85
score: 17.6
coord: 1055..1101
e-value: 0.031
score: 23.4
coord: 638..682
e-value: 6.9E-6
score: 35.6
IPR011641Tyrosine-protein kinase ephrin type A/B receptor-likePFAMPF07699Ephrin_rec_likecoord: 735..783
e-value: 8.6E-8
score: 31.7
coord: 794..843
e-value: 2.8E-7
score: 30.1
coord: 478..518
e-value: 7.3E-7
score: 28.8
IPR000742EGF-like domainSMARTSM00181egf_5coord: 1011..1047
e-value: 0.11
score: 21.6
coord: 849..883
e-value: 0.035
score: 23.3
coord: 387..434
e-value: 76.0
score: 5.9
coord: 650..698
e-value: 160.0
score: 2.2
coord: 888..924
e-value: 1.6E-4
score: 31.1
coord: 929..962
e-value: 0.34
score: 20.0
coord: 968..1006
e-value: 0.57
score: 19.2
coord: 450..499
e-value: 150.0
score: 2.7
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 885..924
score: 10.953
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 1008..1047
score: 14.536
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 926..962
score: 14.729
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 965..1006
score: 11.799
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 846..883
score: 15.69
NoneNo IPR availableGENE3D2.10.50.10coord: 1061..1113
e-value: 0.063
score: 12.9
NoneNo IPR availableGENE3D1.20.5.100coord: 1225..1271
e-value: 1.0E-7
score: 30.9
NoneNo IPR availableGENE3D2.10.50.10coord: 401..468
e-value: 0.0019
score: 18.0
coord: 693..737
e-value: 5.5E-6
score: 26.2
coord: 635..692
e-value: 1.8E-10
score: 40.5
coord: 469..533
e-value: 6.8E-8
score: 32.3
coord: 738..792
e-value: 6.2E-4
score: 19.6
NoneNo IPR availableGENE3D2.10.25.10coord: 966..1009
e-value: 3.0E-6
score: 26.7
NoneNo IPR availableGENE3D2.10.25.10coord: 845..885
e-value: 7.3E-8
score: 32.0
NoneNo IPR availableGENE3D2.10.25.10coord: 1010..1051
e-value: 1.3E-5
score: 24.7
NoneNo IPR availableGENE3D2.10.25.10coord: 886..926
e-value: 3.5E-6
score: 26.2
NoneNo IPR availableGENE3D2.10.25.10coord: 927..965
e-value: 7.7E-8
score: 31.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1273..1302
NoneNo IPR availableCDDcd00054EGF_CAcoord: 850..883
e-value: 4.77338E-5
score: 41.4682
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 912..923
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 1035..1046
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 912..923
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 871..882
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 994..1005
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 994..1005
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 950..961
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 1035..1046
IPR009030Growth factor receptor cysteine-rich domainSUPERFAMILY57184Growth factor receptor domaincoord: 620..750
IPR009030Growth factor receptor cysteine-rich domainSUPERFAMILY57184Growth factor receptor domaincoord: 390..528

Blast
[Close]
BLAST of TCONS_00048541-protein vs. Swiss-Prot (Human)
Match: SVEP1 (Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 OS=Homo sapiens GN=SVEP1 PE=1 SV=3)

HSP 1 Score: 121.324 bits (303), Expect = 2.238e-27
Identity = 117/426 (27.46%), Postives = 173/426 (40.61%), Query Frame = 0 
Query:  686 CPSGFEGEGLQCKPCPIGTF-------------------EENRQCKQCPNGQSTRFERS---TSCEKACSKGEY-LNADNTCSKCAYGRYQPLERHSQRECFYCPKDKTTIKMGSDTIDDCFLGKDQCKYEGQYYNTTLNSCQDCPIASYKEAS-----------GFTP-------TQCTRCADGETTKQEASIRPSDCIPILTPCQQH------------NPCQFPGQCVDKNGNATCVCPRYYTGQFCEKLDGPCKDVDC-NNGSCVPFPNSKYVDHVCICKPGFTGKKCESAHDPCEPNPCYNSNCTNTKPGDYNCSCPLYWGGKRCEKRL----YSPCMNASNCNIRHARCTEDPNVHGKFECKCYRGYEGPNCDEEIDWCEKFPCQLNNTARCRPLGDGTRECHCKTGFAGETCQ-NVKDC 1052
            C  G    G  C  CP+GT+                   E   +CK CP+G  T +  S   + C+  C +G Y  +   TC  C  G YQP  +   R C  CP++ +T+K G+  I  C +    C  EG++  + L  C  CP   Y+  +           G TP       T+C+  +   +  +E+ + P+    I    ++H            NPC   G C        C+CP  YTG  CE     C  + C NNG C         + +C C  G+TG++CE   + C  +PC N          Y C+C   + G  CE  +     +PC+N + C           +  G F CKC  G+ G  C + +D C   PC+  N A C+  G  +  C C  GF G  C+ N+ +C
Sbjct:  988 CRPGSVLRGRMCVNCPLGTYYNLEHFTCESCRIGSYQDEEGQLECKLCPSGMYTEYIHSRNISDCKAQCKQGTYSYSGLETCESCPLGTYQP--KFGSRSCLSCPENTSTVKRGAVNISACGV---PCP-EGKFSRSGLMPCHPCPRDYYQPNAGKAFCLACPFYGTTPFAGSRSITECSSFSSTFSAAEESVVPPASLGHIK---KRHEISSQVFHECFFNPCHNSGTCQQLGRGYVCLCPLGYTGLKCETDIDECSPLPCLNNGVC----KDLVGEFICECPSGYTGQRCEENINECSSSPCLNKGICVDGVAGYRCTCVKGFVGLHCETEVNECQSNPCLNNAVCE----------DQVGGFLCKCPPGFLGTRCGKNVDECLSQPCK--NGATCKD-GANSFRCLCAAGFTGSHCELNINEC 1387

HSP 2 Score: 120.939 bits (302), Expect = 2.584e-27
Identity = 120/448 (26.79%), Postives = 177/448 (39.51%), Query Frame = 0 
Query:  686 CPSG--FEGEGLQCKPCPIGTFEENR---QCKQCPNGQSTRFERS---TSCEKACSKGEY-LNADNTCSKCAYGRYQPLERHSQRECFYCPKDKTTIKMGSDTIDDCFLGKDQCKYEGQYYNTTLNSCQDCPIASYKEAS-----------GFTP-------TQCTRCADGETTKQEASIRPSDCIPI---------------LTPCQQHNPCQ----------------------------FP----GQCVDKNGNATCVCPRYYTGQFCEKLDGPCKDVDC-NNGSCVPFPNSKYVDHVCICKPGFTGKKCESAHDPCEPNPCYNSNCTNTKPGDYNCSCPLYWGGKRCEKR----LYSPCMNASNCNIRHARCTEDPNVHGKFECKCYRGYEGPNCDEEIDWCEKFPCQLNNTARCRPLGDGTRECHCKTGFAGETCQNVKDCGI 1054
            CP G  +  E   C+ C IG++++     +CK CP+G  T +  S   + C+  C +G Y  +   TC  C  G YQP  +   R C  CP++ +T+K G+  I  C +    C  EG++  + L  C  CP   Y+  +           G TP       T+C+  +   +  +E+ + P+    I                 PC     CQ                             P    G C D  G   C CP  YTGQ CE+    C    C N G CV         + C C  GF G  CE+  + C+ NPC N+     + G + C CP  + G RC K     L  PC N + C           +    F C C  G+ G +C+  I+ C+  PC+  N A C    + +  C C+ GF+G+ C+  +  G 
Sbjct: 1002 CPLGTYYNLEHFTCESCRIGSYQDEEGQLECKLCPSGMYTEYIHSRNISDCKAQCKQGTYSYSGLETCESCPLGTYQP--KFGSRSCLSCPENTSTVKRGAVNISACGV---PCP-EGKFSRSGLMPCHPCPRDYYQPNAGKAFCLACPFYGTTPFAGSRSITECSSFSSTFSAAEESVVPPASLGHIKKRHEISSQVFHECFFNPCHNSGTCQQLGRGYVCLCPLGYTGLKCETDIDECSPLPCLNNGVCKDLVGEFICECPSGYTGQRCEENINECSSSPCLNKGICV----DGVAGYRCTCVKGFVGLHCETEVNECQSNPCLNNAVCEDQVGGFLCKCPPGFLGTRCGKNVDECLSQPCKNGATCK----------DGANSFRCLCAAGFTGSHCELNINECQSNPCR--NQATCVDELN-SYSCKCQPGFSGKRCETEQSTGF 1426
The following BLAST results are available for this feature:
BLAST of TCONS_00048541-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SVEP12.238e-2727.46Sushi, von Willebrand factor type A, EGF and pentr... [more]
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