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Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00048295-protein ID=TCONS_00048295-protein|Name=TCONS_00048295-protein|organism=Clytia hemisphaerica|type=polypeptide|length=552bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00048295-protein vs. Swiss-Prot (Human)
Match: HMCN1 (Hemicentin-1 OS=Homo sapiens GN=HMCN1 PE=1 SV=2) HSP 1 Score: 144.436 bits (363), Expect = 3.528e-36 Identity = 110/311 (35.37%), Postives = 133/311 (42.77%), Query Frame = 0
Query: 152 VDGGWSSWGKYGACVGRCGSKGVQRRYRTCSKPRPVDGGKPCVGPRFSTKTCQKAACP--GKWQNWSSWTQCV-------QTRQRRCTVNGKPAPQSQCGGNPTERRTCQKCQGN------WGGWGVWSDCGTPNKPCGTGSRVRRRVC-LPFPGF---HCPGKSEERISCQHQ---CKKTWTAWGVWGRCSKSCGGGIRIRARKCVAVGTNIVVSGCPGVSSQQGACNTQVCPIW-IWGPWS---RCSRTCGSGSQNRAQICVVPGTSPPKGTTGCSGKGKVESKSCLIRGCPVWTQWGSWSPCPKCRPS 436
V GG+S W + AC CG KG+Q+R R C++P P +GGKPC G + CQ CP G W WS W +C QTR R C P Q GG P E + N G W W GT ++ CG G++ R R+C P P F +C G + C + W W W CS SCGGG R R R C C G Q CN+ CP W PWS CSRTC G R + C P P G C G + + C CPV WGSW +C S
Sbjct: 4528 VHGGFSQWSAWRACSVTCG-KGIQKRSRLCNQPLPANGGKPCQGSDLEMRNCQNKPCPVDGSWSEWSLWEECTRSCGRGNQTRTRTCN-----NPSVQHGGRPCEGNAVEIIMCNIRPCPVHGAWSAWQPWGTCSESCGKGTQTRARLCNNPPPAFGGSYCDGAETQMQVCNERNCPIHGKWATWASWSACSVSCGGGARQRTRGCSDPVPQYGGRKCEGSDVQSDFCNSDPCPTHGNWSPWSGWGTCSRTCNGGQMRRYRTCDNP--PPSNGGRACGGPDS-QIQRCNTDMCPVDGSWGSWHSWSQCSAS 4829 HSP 2 Score: 124.02 bits (310), Expect = 1.779e-29 Identity = 101/296 (34.12%), Postives = 125/296 (42.23%), Query Frame = 0
Query: 151 PVDGGWSSWGKYGACVGRCGSKGVQRRYRTCSKPRPVDGGKPCVGPRFSTKTCQKAACP--GKWQNWSSWTQC-------VQTRQRRCTVNGKPAPQ---SQCGGNPTERRTCQK----CQGNWGGWGVWSDCGTPNKPCGTGSRVRRRVCL-PFPGF---HCPGKSEERISCQHQ---CKKTWTAWGVWGRCSKSCGGGIRIRARKCVAVGTNIVVSGCPGVSSQQGACNTQVCPI---W-IWGPWSRCSRTCGSGSQNRAQICVVPGTSPPKGTTGCSGKGKVESKSCLIRGCP 419
PVDG WS W + C CG +G Q R RTC+ P GG+PC G C CP G W W W C QTR R C P P S C G T+ + C + G W W WS C CG G+R R R C P P + C G + C W+ W WG CS++C GG R R C + C G SQ CNT +CP+ W W WS+CS +CG G + R ++C P P KG C G + C ++ CP
Sbjct: 4584 PVDGSWSEWSLWEECTRSCG-RGNQTRTRTCNNPSVQHGGRPCEGNAVEIIMCNIRPCPVHGAWSAWQPWGTCSESCGKGTQTRARLC---NNPPPAFGGSYCDGAETQMQVCNERNCPIHGKWATWASWSACSV---SCGGGARQRTRGCSDPVPQYGGRKCEGSDVQSDFCNSDPCPTHGNWSPWSGWGTCSRTCNGGQMRRYRTCDNPPPSNGGRACGGPDSQIQRCNTDMCPVDGSWGSWHSWSQCSASCGGGEKTRKRLCDHP--VPVKGGRPCPGD-TTQVTRCNVQACP 4869 The following BLAST results are available for this feature:
BLAST of TCONS_00048295-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
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