TCONS_00048172-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00048172-protein
Unique Name	TCONS_00048172-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	378

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00048172-protein ID=TCONS_00048172-protein|Name=TCONS_00048172-protein|organism=Clytia hemisphaerica|type=polypeptide|length=378bp
MPSFSFGLKDGGWRLLYRRKYTIGLVLTLLVFLRSIFYHVPAIHFTLRQN
TKRVPFVYKDVVINPTVDHGTNLFALILVSSSPHSEAHRQKRDAIRKTWG
NCANLLTMYRESRHLPKDIACKLVFFIARSDHDEAIRKEANENNDVLLVD
YTDRYSAITLKLMVAFKWASSLNPSFILKTDDDVYIHTPKLFGGLVRETD
GDFYGGIVLEGSKVQREVGHRHYISREQYKDDYYPPYCKGAMYVFSGNLL
PRILYAADYVPYMHVDDAYVGLLMYYIGVEVENLHFFVHFKTVFLAFPYT
LTDCAINRIIAISDSFQADMIYSIHERIKASENMLLTRYLCYTDSRATII
VVCLLIIIVVTVYNVLKNARIIGFHYKQ

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_030658	XLOC_030658	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00048172	TCONS_00048172	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002659	Glyco_trans_31

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **Molecular Function**
Term	Definition
GO:0008378	galactosyltransferase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006486	protein glycosylation

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006486	protein glycosylation
cellular_component	GO:0016020	membrane
molecular_function	GO:0008378	galactosyltransferase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002659	Glycosyl transferase, family 31	PFAM	PF01762	Galactosyl_T	coord: 91..284 e-value: 1.2E-38 score: 132.8

Blast

[Close]

BLAST of TCONS_00048172-protein vs. Swiss-Prot (Human)
Match: B3GT5 (Beta-1,3-galactosyltransferase 5 OS=Homo sapiens GN=B3GALT5 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.982e-26
Identity = 75/272 (27.57%), Postives = 131/272 (48.16%), Query Frame = 0

Query:   52 KRVPFVYK---DVVINPTVD-HGTNLFALILVSSSPHSEAHRQ--KRDAIRKTWGNCANLLTMYRESRHLPKDIACKLVFFIARSD---HDEAIRKEANENNDVLLVDYTDRYSAITLKLMVAFKWASSLNP--SFILKTDDDVYIHTPKLFGGLVRETDGD-FYGGIVLEGSKVQREVGHRHYISREQYKDDYYPPYCKGAMYVFSGNLLPRILYAADYVPYMHVDDAYVGLLMYYIGVEVENLHFFVHFKTVFLAFPYTLTDCAINRIIA 311
            K   FVYK   + +  P  D   T  F ++LV+SS     H+Q  +R AIR+TWG              + K    K  F +  +      + + +E+  + D++  D+ D Y  +TLK M+  +W     P  +F++KTD D++I+   L   L+++     F+ G +       R+   + ++S+ +Y  D YPP+C G  YVFSG++  ++   +  VPY+ ++D +VGL +  + + +E L    H +  F       + C   RI+A
Sbjct:   32 KEQSFVYKKDGNFLKLPDTDCRQTPPFLVLLVTSS-----HKQLAERMAIRQTWGK-----------ERMVKGKQLKTFFLLGTTSSAAETKEVDQESQRHGDIIQKDFLDVYYNLTLKTMMGIEWVHRFCPQAAFVMKTDSDMFINVDYLTELLLKKNRTTRFFTGFLKLNEFPIRQPFSKWFVSKSEYPWDRYPPFCSGTGYVFSGDVASQVYNVSKSVPYIKLEDVFVGLCLERLNIRLEEL----HSQPTFFPGGLRFSVCLFRRIVA 283

The following BLAST results are available for this feature:

BLAST of TCONS_00048172-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00048172-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
B3GT5	1.982e-26	27.57	Beta-1,3-galactosyltransferase 5 OS=Homo sapiens G...	[more]

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TCONS_00048172-protein (polypeptide) - C. hemisphaerica