TCONS_00047983-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00047983-protein
Unique NameTCONS_00047983-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1650

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00047983-protein ID=TCONS_00047983-protein|Name=TCONS_00047983-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1650bp
MVGGKGGLPGPVASSGFPEGLMVSFNSGDPVDLRYAGGPVVPEGFVLRGT
LDLFGYQIKAWIALSKTSILIDGELDPINLGGHVIMARNATHKHVGPKLY
FNYKQASLALPYFKMYFEGYVKILGIEIGAFLNITMEAMEIHIYGKVWNL
IYCDLYVSSSYDYRSIKDAHFYIRVIVDLRGLTDAIEKARRSVDQAFKAA
QKHLRSAISHVQKQKQKCKEKMTLKCNRCHNIKCKETAKKCKGFLDDLFE
KLNPKNWWRRRKRRSLARQQRNEYFALHLRKKRFTKFFCEKIVGGACQGI
AYLCEGSCNLVSFIGRGLCHTLDIAVGVLKFAEAASGWINSAIQFLLQMF
LVHGIRFELGLGQKFNGFMVGAAIDLTLFGNRMYFEFQFDLKNPVRSITN
AKDGSLYRYKKGVRQLRTELTFNPYDNPNPFSDFDLGGTFGIEALNTGDE
NRLGACLGALTTKDNGVVKLLPCNETDERQRWLYTLDGKLINLYSKKCIY
FGKSEKSGLTQYDCQKGDKTRMQHGCELDTRTIKLRREDLCLTMKGKASN
KGPGAIAHHGSMKCIHVGATNRLVLRSGCHRVEANFQMTDMGHIKQISTN
RCLRPANGQPMVGAKLELTNDVKACHQFEFTSLGSIRHAQSRLCIQPANM
EMNPHDYTELILGSRCDHTQAGRSSGSPADQELTFTFIPQENSLQMERCA
SFYGSVAEQNFVVMGEETNPVCSKFSKNLAYRKAASQSSIKHNGFPSRAV
DGNFNFQWEKGSCMHTNEERDPWWRVDLGKEYIVTDITIMNRGEHGERFN
NVQVHVGQYLDIKSNPVCHERIVSSKDGEVIRLSCDPPIPGRFVGVQMYG
KGILSMCEVVVASRLGGMTDLCQVENGGCEHICSNKCGKELSCSCLPGYR
LAYDGRSCIDINECLSNNGGCRVDKQARCINYPGGFYCGCNRGYILADNS
LTECVDLNECGSGNGGCEQMCNNTLGGYMCTCRKGFERKPNNPYGCQDIN
ECLSNNGGCDHNCHDYQGGHYCSCKVGFRLRKDGKACEELFCPVLEAPYH
GHVTPATCSKKYENIAVGSTCKFECSKGFELKTNVGAQTLSCRIDGTWDH
GTPNCHPVKCPTLQRPINGGLVPARCHDDQRGYNEFGQRCVTYCRHGYRL
RGAPTKYCQANKSWSNNNGPLQCVKIIEPPYVNCPTDIQVTLPNNANQIS
LGSKFQQPQSNVNSSMITSYPDNVGPDYKFRFGKTLVSYVAMANGQQVSC
SYFVDVKDSTPPTVSDCPKDIIQNTGRLSEIITWAEPKFSDNVGVRRVMG
PVRKPGEIWYPGEEMIMQYVASDIAGNQKKCSFKVALKAASCPKLYQTDD
AYLTVTPITHQKLYSAHCQHARTLFGNYDPNGVSVRCRDGDYHIQTTNIG
HSFPDCVDYHKISKTQECTEGFQRFTYVDWFYDTIHFCSMCPSGTFWNNA
TRTCKQCIVGEYQDDHGMSTCETCPLEKSTLKTGSKSIKDCYNQCLPGSY
SSTGLDLANEKCALCPKGTFSYLHGSTECTVCPGQSTTDKEGTALESKCT
ASLSIVGILPLGPNVSVKRNFELRLSCYFEGSPVPDATWLKEGGNLPNSH
RLEELFDMHLIKIGISLVVPSVSTRDAGKYTCIVKNKNGNDHRAVNVKVV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030542XLOC_030542Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00047983TCONS_00047983Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000742EGF-like_dom
IPR003599Ig_sub
IPR000436Sushi_SCR_CCP_dom
IPR003598Ig_sub2
IPR011641Tyr-kin_ephrin_A/B_rcpt-like
IPR006585FTP1
IPR001881EGF-like_Ca-bd_dom
IPR003410HYR_dom
IPR013783Ig-like_fold
IPR000772Ricin_B_lectin
IPR008979Galactose-bd-like
IPR026823cEGF
IPR000421FA58C
IPR013098Ig_I-set
IPR013032EGF-like_CS
IPR000152EGF-type_Asp/Asn_hydroxyl_site
IPR018097EGF_Ca-bd_CS
IPR007110Ig-like_dom
IPR009030Growth_fac_rcpt_
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000742EGF-like domainSMARTSM00181egf_5coord: 1001..1038
e-value: 0.0021
score: 27.3
coord: 871..909
e-value: 7.2
score: 15.6
coord: 959..997
e-value: 2.2
score: 17.3
coord: 913..955
e-value: 0.018
score: 24.2
IPR003599Immunoglobulin subtypeSMARTSM00409IG_3ccoord: 1562..1650
e-value: 3.4E-7
score: 39.9
IPR000436Sushi/SCR/CCP domainSMARTSM00032CCP_2coord: 1042..1105
e-value: 1.7E-8
score: 44.3
coord: 1110..1173
e-value: 0.0044
score: 26.2
IPR000436Sushi/SCR/CCP domainPFAMPF00084Sushicoord: 1110..1173
e-value: 2.2E-5
score: 24.9
coord: 1042..1105
e-value: 7.5E-8
score: 32.8
IPR000436Sushi/SCR/CCP domainPROSITEPS50923SUSHIcoord: 1040..1107
score: 9.628
IPR000436Sushi/SCR/CCP domainPROSITEPS50923SUSHIcoord: 1108..1175
score: 8.665
IPR000436Sushi/SCR/CCP domainCDDcd00033CCPcoord: 1110..1174
e-value: 3.28796E-5
score: 42.45
IPR000436Sushi/SCR/CCP domainCDDcd00033CCPcoord: 1042..1105
e-value: 4.03114E-8
score: 51.3096
IPR000436Sushi/SCR/CCP domainSUPERFAMILY57535Complement control module/SCR domaincoord: 1103..1167
IPR000436Sushi/SCR/CCP domainSUPERFAMILY57535Complement control module/SCR domaincoord: 1041..1119
IPR003598Immunoglobulin subtype 2SMARTSM00408igc2_5coord: 1568..1639
e-value: 3.2E-8
score: 43.3
IPR011641Tyrosine-protein kinase ephrin type A/B receptor-likeSMARTSM01411GCC2_GCC3_2coord: 1444..1491
e-value: 2.6E-9
score: 46.9
coord: 1498..1549
e-value: 2.6E-7
score: 40.3
IPR011641Tyrosine-protein kinase ephrin type A/B receptor-likePFAMPF07699Ephrin_rec_likecoord: 1506..1549
e-value: 3.0E-8
score: 33.2
coord: 1444..1491
e-value: 1.6E-11
score: 43.6
IPR006585Fucolectin tachylectin-4 pentraxin-1SMARTSM00607ftpcoord: 726..868
e-value: 1.7E-28
score: 110.7
IPR001881EGF-like calcium-binding domainSMARTSM00179egfca_6coord: 998..1038
e-value: 2.8E-7
score: 40.2
coord: 910..955
e-value: 3.1E-7
score: 40.0
coord: 956..997
e-value: 4.3E-6
score: 36.2
IPR001881EGF-like calcium-binding domainPFAMPF07645EGF_CAcoord: 956..991
e-value: 1.4E-5
score: 25.1
IPR003410HYR domainPFAMPF02494HYRcoord: 1257..1336
e-value: 7.6E-11
score: 42.1
IPR003410HYR domainPROSITEPS50825HYRcoord: 1257..1339
score: 20.917
NoneNo IPR availableGENE3D2.10.50.10coord: 1441..1494
e-value: 1.0E-9
score: 38.1
NoneNo IPR availableGENE3D2.80.10.50coord: 553..699
e-value: 1.3E-6
score: 27.9
NoneNo IPR availableGENE3D2.40.155.10coord: 938..961
e-value: 4.3E-8
score: 32.4
coord: 982..1004
e-value: 3.5E-9
score: 36.0
NoneNo IPR availableGENE3D2.10.25.10coord: 916..937
e-value: 5.9E-11
score: 41.8
NoneNo IPR availableGENE3D2.80.10.50coord: 444..552
e-value: 5.2E-9
score: 35.8
NoneNo IPR availableGENE3D2.10.70.10coord: 1042..1106
e-value: 5.8E-13
score: 48.6
NoneNo IPR availableGENE3D2.10.70.10coord: 1107..1176
e-value: 2.1E-10
score: 40.4
NoneNo IPR availableGENE3D2.10.50.10coord: 1517..1548
e-value: 0.0039
score: 16.6
coord: 1495..1516
e-value: 0.0087
score: 15.5
NoneNo IPR availablePFAMPF14670FXa_inhibitioncoord: 1002..1037
e-value: 9.8E-9
score: 35.3
NoneNo IPR availableGENE3D2.10.25.10coord: 868..915
e-value: 7.0E-11
score: 41.7
coord: 962..981
e-value: 7.8E-10
score: 38.3
coord: 1005..1041
e-value: 5.1E-12
score: 45.3
NoneNo IPR availableCDDcd00054EGF_CAcoord: 998..1031
e-value: 3.29246E-4
score: 39.157
NoneNo IPR availableCDDcd00161RICINcoord: 456..518
e-value: 1.50165E-6
score: 47.5002
NoneNo IPR availableCDDcd00096Igcoord: 1573..1646
e-value: 4.93539E-12
score: 63.2771
NoneNo IPR availableCDDcd00054EGF_CAcoord: 910..946
e-value: 5.40783E-5
score: 41.4682
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 870..921
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 1549..1650
e-value: 1.9E-16
score: 59.6
IPR000772Ricin B, lectin domainPFAMPF00652Ricin_B_lectincoord: 453..550
e-value: 7.4E-9
score: 35.8
IPR000772Ricin B, lectin domainPROSITEPS50231RICIN_B_LECTINcoord: 454..514
score: 10.877
IPR000772Ricin B, lectin domainSUPERFAMILY50370Ricin B-like lectinscoord: 454..548
IPR000772Ricin B, lectin domainSUPERFAMILY50370Ricin B-like lectinscoord: 551..656
IPR008979Galactose-binding domain-likeGENE3D2.60.120.260coord: 721..864
e-value: 1.3E-26
score: 92.9
IPR008979Galactose-binding domain-likeSUPERFAMILY49785Galactose-binding domain-likecoord: 726..861
IPR026823Complement Clr-like EGF domainPFAMPF12662cEGFcoord: 892..913
e-value: 5.9E-9
score: 35.6
IPR000421Coagulation factor 5/8 C-terminal domainPFAMPF00754F5_F8_type_Ccoord: 736..850
e-value: 4.9E-7
score: 29.8
IPR013098Immunoglobulin I-setPFAMPF07679I-setcoord: 1564..1649
e-value: 3.4E-11
score: 43.0
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 1022..1037
IPR000152EGF-type aspartate/asparagine hydroxylation sitePROSITEPS00010ASX_HYDROXYLcoord: 929..940
IPR018097EGF-like calcium-binding, conserved sitePROSITEPS01187EGF_CAcoord: 956..980
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 1560..1648
score: 10.934
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 1563..1649
IPR009030Growth factor receptor cysteine-rich domainSUPERFAMILY57184Growth factor receptor domaincoord: 928..1042
IPR009030Growth factor receptor cysteine-rich domainSUPERFAMILY57184Growth factor receptor domaincoord: 1379..1542

Blast
[Close]
BLAST of TCONS_00047983-protein vs. Swiss-Prot (Human)
Match: SVEP1 (Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 OS=Homo sapiens GN=SVEP1 PE=1 SV=3)

HSP 1 Score: 134.42 bits (337), Expect = 3.772e-31
Identity = 104/398 (26.13%), Postives = 157/398 (39.45%), Query Frame = 0 
Query:  980 CTCRKGFE--------------RKPNNPYGCQDINECLSN-NGGCDHNCH---DYQGGHYCSCKVGFRLRKDGKACEELFCPVLEAPYHGHVTPATCSKKYENIAVGSTCKFECSKGFELKTNVGAQTLSCRIDGTWDHGTPNCHPVKCPTLQRPINGGLVPARCHDDQRGYNEFGQRCVTYCRHGYRLRGAPTKY-CQANKSWSNNNGPLQCVKIIEPPYVNCPTDIQVTLPNNANQISLGSKFQQPQSNVNSSMITSYPDNVGPDYKFRFGKTLVSYVAM-ANGQQVSCSYFVDVKDSTPPTVSDCPKDIIQNTGRLSEIITWAEPKFSDNVGVRRVMGPVRKPGEIWYPGEEMIMQYVASDIAGNQKKCSFKVALKAASCPKLYQTDDAYLTVTP 1357
            C CR+G+               + P N Y  Q  N C ++ N  C   CH   D  G     C            C    CP L  P HGH++ +T    Y+     +TC   C +G+ L+   G+  L+C+ +  WD   P C    C T Q P +  + P  C        +FG  C   CR G+ L G      C  +  W+       C K +E P +NCP DI+       +  ++  +    + N    +         P Y F  G   + Y A   +G Q SC + + V D+ PP +  C               +W EP+FSDN G   V+      G++ +P  E I+QY A+D +GN + C   + +K + C   +   +     TP
Sbjct:  360 CVCREGYRASGQTCELVHCPALKPPENGYFIQ--NTCNNHFNAACGVRCHPGFDLVGSSIILCLPNGLWSGSESYCRVRTCPHLRQPKHGHISCSTREMLYK-----TTCLVACDEGYRLE---GSDKLTCQGNSQWDGPEPRCVERHCSTFQMPKDVIISPHNCGKQPA---KFGTICYVSCRQGFILSGVKEMLRCTTSGKWNVGVQAAVC-KDVEAPQINCPKDIEAKTLEQQDSANVTWQIPTAKDNSGEKVSVHVHPAFTPPYLFPIGDVAIVYTATDLSGNQASCIFHIKVIDAEPPVIDWCRSPPPVQVSEKVHAASWDEPQFSDNSGAELVITRSHTQGDL-FPQGETIVQYTATDPSGNNRTCDIHIVIKGSPCEIPFTPVNGDFICTP 742
The following BLAST results are available for this feature:
BLAST of TCONS_00047983-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SVEP13.772e-3126.13Sushi, von Willebrand factor type A, EGF and pentr... [more]
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