TCONS_00047751-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00047751-protein
Unique NameTCONS_00047751-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length408

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00047751-protein ID=TCONS_00047751-protein|Name=TCONS_00047751-protein|organism=Clytia hemisphaerica|type=polypeptide|length=408bp
MKPHESIIKLVCISGFLDLFGVAMVYPQLVHRAKELGASPRNIGLFGSIY
GTLQFFSSPVMGQISDHLGRRNVLIVALLGTSLSYFLLGTVGSILFLSLA
RIPSGIFKFSSAMNKAFLVDMNPPESRAGVLGKFNAASSIGFVIGPTIAG
WMMQTSGGFQLVAYISGTIFIINALFNHFVVSKYLDTLIDVQQNNQRDND
KKPISLFAAFNVFRDAQNVPWHAVWEPFLNRFLMSFSLIIYRANFTSILA
FKFGTDTLMNGYIQSFNGATSMATGWMLGIISNFFPSNTLMHNTFSIILV
ISLFILSVTPSLYIYVLCIIPLCVSSSVLRVTNGTAIANRAGEEARGLVM
GLADTLTALARAFGPAIAGFALEVSYEAPGLCAATFALIGTLIGLYAKSE
ATRMLHVE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030405XLOC_030405Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00047751TCONS_00047751Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001958Tet-R_TetA/multi-R_MdtG
IPR011701MFS
IPR005829Sugar_transporter_CS
IPR020846MFS_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005215 transporter activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001958Tetracycline resistance protein TetA/multidrug resistance protein MdtGPRINTSPR01035TCRTETAcoord: 17..33
score: 29.41
coord: 74..98
score: 28.8
coord: 349..372
score: 26.25
coord: 101..122
score: 28.64
coord: 131..153
score: 31.3
NoneNo IPR availableGENE3D1.20.1250.20coord: 6..199
e-value: 8.9E-30
score: 103.0
NoneNo IPR availableGENE3D1.20.1250.20coord: 217..405
e-value: 4.3E-14
score: 51.7
IPR011701Major facilitator superfamilyPFAMPF07690MFS_1coord: 11..365
e-value: 4.0E-39
score: 134.4
IPR005829Sugar transporter, conserved sitePROSITEPS00216SUGAR_TRANSPORT_1coord: 61..77
IPR020846Major facilitator superfamily domainPROSITEPS50850MFScoord: 7..402
score: 22.947
IPR020846Major facilitator superfamily domainCDDcd06174MFScoord: 10..396
e-value: 3.65325E-24
score: 99.6956
IPR020846Major facilitator superfamily domainSUPERFAMILY103473MFS general substrate transportercoord: 7..400

Blast
[Close]
BLAST of TCONS_00047751-protein vs. Swiss-Prot (Human)
Match: MFSD9 (Major facilitator superfamily domain-containing protein 9 OS=Homo sapiens GN=MFSD9 PE=2 SV=2)

HSP 1 Score: 197.593 bits (501), Expect = 2.105e-58
Identity = 133/412 (32.28%), Postives = 215/412 (52.18%), Query Frame = 0 
Query:   10 LVCI--SGFLDLFGVAMVYPQLVHRAKELGASPRNIGLFGSIYGTLQFFSSPVMGQISDHLGRRNVLIVALLGTSLSYFLLGTVGSILFLSLARIPSGIFKFSSAMNKAFLVDMNPPESRAGVLGKFNAASSIGFVIGPTIAGWMMQTSGGFQLVAYISGTIFIINALF----------------------NHFVVSKYLDTLIDVQQNNQRDNDKKPISLFAAFNV-FRDAQNVPWHAVWEPFLNRFLMSFSLIIYRANFTSILAFKFGTDTLMNGYIQSFNGATSMATGWMLGIISNFFPSNT---LMHNTFSIILVISLFILSVTPSLYIYVLCIIPLCVSSSVLRVTNGTAIANRAGEEARGLVMGLADTLTALARAFGPAIAGFALEVSYEAPGLCAATFALIGTLI 393
            L+C+   GFLDLFGV+MV P L    K LGASP   G+ GS YG LQ FSS ++G  SD +GRR+ L+  +L ++L Y LLG   ++    LAR+P+GIFK + ++++A L D+ P + R  V+G FN AS +GF++GP + G++ +   GF L A+I   +FI+NA                         H ++ +  DT+ +   + +    KK    +    +  R+ +N+ +  +W+ FL R LM+ ++++Y +NF   L  +FG    + GY+ S++       G  LG I   +  N+   L+H+  SI+    L + S+ P++   VL    L  S+++ R           G +A G ++G+  ++TA+ R   P ++G A EVS   P    A  AL+   I
Sbjct:   46 LLCLYLVGFLDLFGVSMVVPLLSLHVKSLGASPTVAGIVGSSYGILQLFSSTLVGCWSDVVGRRSSLLACILLSALGYLLLGAATNVFLFVLARVPAGIFKHTLSISRALLSDVVPEKERPLVIGHFNTASGVGFILGPVVGGYLTELEDGFYLTAFICFLVFILNAGLVWFFPWREAKPGSTEKGLPLRKTHVLLGRSHDTVQEAATSRRARASKKTAQPWVEVVLALRNMKNLLFSEMWDIFLVRLLMAMAVMLYYSNFVLALEERFGVRPKVTGYLISYSSMLGAVAGLALGPILRLYKHNSQALLLHS--SILTCTLLLLYSLAPTMGAVVLSSTLLSFSTAIGRTCITDLQLTVGGAQASGTLIGVGQSVTAVGRIIAPLLSGVAQEVSPCGPPSLGAVLALVAIFI 455
The following BLAST results are available for this feature:
BLAST of TCONS_00047751-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MFSD92.105e-5832.28Major facilitator superfamily domain-containing pr... [more]
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